RNF139 (translocation in renal carcinoma, chromosome 8 gene)
2004-06-01 Anita Bonné  , Eric Schoenmakers  , Ad Geurts van Kessel   AffiliationDepartment of Human Genetics (417), P.O. Box 9101, 6500 HB Nijmegen, The Netherlands
Identity
HGNC
LOCATION
8q24.13
LOCUSID
ALIAS
HRCA1,RCA1,TRC8
FUSION GENES
DNA/RNA
Description
The TRC8 gene covers 13.96 kb. The gene contains 2 confirmed introns, 2 of which are alternative. The gene showed similarity to the hereditary basal cell carcinoma/segment polarity gene, patched (PTCH) This similarity involved 2 regions of patched, the putative sterol-sensing domain and the second extracellular loop that participates in the binding of sonic hedgehog (SHH). In the t(3;8) translocation, TRC8 was found to be fused to FHIT and disrupted within the sterol-sensing domain. In contrast, the FHIT coding region was maintained and expressed. In a series of sporadic renal carcinomas, an acquired TRC8 mutation was identified. By analogy to patched, TRC8 might function as a signaling receptor, and other pathway members, to be defined, are mutation candidates in malignant diseases involving the kidney and thyroid.
Proteins
Localisation
Plasma membrane
Function
The protein encoded by this gene is a multi-membrane spanning protein containing a RING-H2 finger. This protein is located in the endoplasmic reticulum, and has been shown to possess ubiquitin ligase activity. This gene was found to be interrupted by a t(3:8) translocation in a family with hereditary renal and non-medulary thyroid cancer. Studies of the Drosophila counterpart suggested that this protein may interact with tumor suppressor protein VHL, as well as with COPS5/JAB1, a protein responsible for the degradation of tumor suppressor CDKN1B/P27KIP
Implicated in
Entity name
t(3;8)(p14.2;q24.1) and hereditary renal cell cancer.
Disease
familial renal cell cancer
Cytogenetics
Disruption of the gene because of the t(3;8) translocation.
Hybrid gene
FHIT/TRC8. Although studies demonstrated that the 3p14.2 breakpoint interrupted the fragile histidine triad gene (FHIT) in its 5-prime noncoding region, several reasons made it unlikely that FHIT is causally related to renal or other malignancies.
Article Bibliography
| Pubmed ID | Last Year | Title | Authors |
|---|---|---|---|
| 11755778 | 2002 | Sonic Hedgehog signalling in the developing and adult brain. | Charytoniuk D et al |
| 470981 | 1979 | Hereditary renal-cell carcinoma associated with a chromosomal translocation. | Cohen AJ et al |
| 9689122 | 1998 | The hereditary renal cell carcinoma 3;8 translocation fuses FHIT to a patched-related gene, TRC8. | Gemmill RM et al |
| 10500182 | 1999 | RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. | Lorick KL et al |
Other Information
Locus ID:
NCBI: 11236
MIM: 603046
HGNC: 17023
Ensembl: ENSG00000170881
Variants:
dbSNP: 11236
ClinVar: 11236
TCGA: ENSG00000170881
COSMIC: RNF139
RNA/Proteins
| Gene ID | Transcript ID | Uniprot |
|---|---|---|
| ENSG00000170881 | ENST00000303545 | Q8WU17 |
| ENSG00000170881 | ENST00000517684 | E5RH85 |
Expression (GTEx)
Pathways
Protein levels (Protein atlas)
References
| Pubmed ID | Year | Title | Citations |
|---|---|---|---|
| 34106407 | 2021 | An E3 Ubiquitin Ligase RNF139 Serves as a Tumor-Suppressor in Glioma. | 2 |
| 34106407 | 2021 | An E3 Ubiquitin Ligase RNF139 Serves as a Tumor-Suppressor in Glioma. | 2 |
| 30563842 | 2019 | Insulin-induced gene 1 (INSIG1) inhibits HIV-1 production by degrading Gag via activity of the ubiquitin ligase TRC8. | 3 |
| 30563842 | 2019 | Insulin-induced gene 1 (INSIG1) inhibits HIV-1 production by degrading Gag via activity of the ubiquitin ligase TRC8. | 3 |
| 29519897 | 2018 | MARCH6 and TRC8 facilitate the quality control of cytosolic and tail-anchored proteins. | 36 |
| 29519897 | 2018 | MARCH6 and TRC8 facilitate the quality control of cytosolic and tail-anchored proteins. | 36 |
| 27998983 | 2017 | Bag1 Co-chaperone Promotes TRC8 E3 Ligase-dependent Degradation of Misfolded Human Ether a Go-Go-related Gene (hERG) Potassium Channels. | 16 |
| 28662643 | 2017 | E3 ubiquitin ligase, RNF139, inhibits the progression of tongue cancer. | 6 |
| 27998983 | 2017 | Bag1 Co-chaperone Promotes TRC8 E3 Ligase-dependent Degradation of Misfolded Human Ether a Go-Go-related Gene (hERG) Potassium Channels. | 16 |
| 28662643 | 2017 | E3 ubiquitin ligase, RNF139, inhibits the progression of tongue cancer. | 6 |
| 26210183 | 2015 | Identifying the ERAD ubiquitin E3 ligases for viral and cellular targeting of MHC class I. | 27 |
| 26210183 | 2015 | Identifying the ERAD ubiquitin E3 ligases for viral and cellular targeting of MHC class I. | 27 |
| 22689053 | 2013 | TRC8 suppresses tumorigenesis through targeting heme oxygenase-1 for ubiquitination and degradation. | 27 |
| 22689053 | 2013 | TRC8 suppresses tumorigenesis through targeting heme oxygenase-1 for ubiquitination and degradation. | 27 |
| 20068067 | 2010 | The TRC8 ubiquitin ligase is sterol regulated and interacts with lipid and protein biosynthetic pathways. | 34 |
Citation
Anita Bonné ; Eric Schoenmakers ; Ad Geurts van Kessel
RNF139 (translocation in renal carcinoma, chromosome 8 gene)
Atlas Genet Cytogenet Oncol Haematol. 2004-06-01
Online version: http://atlasgeneticsoncology.org/gene/500/rnf139-(translocation-in-renal-carcinoma-chromosome-8-gene)
