MAPK13 (mitogen-activated protein kinase 13)
2009-12-01 Maria Isabel Cerezo-Guisado  , Ana Cuenda   AffiliationCentro Nacional de Biotecnologia-CSIC, Department of Immunology, Oncology, Madrid, Spain
Identity
HGNC
LOCATION
6p21.31
IMAGE

LEGEND
MAPK13 genomic context (chromosome 6, location 6p21.31).
LOCUSID
ALIAS
MAPK
DNA/RNA

Genomic organization of MAPK13 gene on chromosome 6p21.31. The boxes indicate coding regions (exon 1-12) of the gene.
Description
The MAPK13 entire gene spans 9.58 Kb on the short arm of chromosome 6. It contains 12 exons.
Transcription
The MAPK13 gene encodes a 365 amino-acid protein of about 40 KDa. No splice variants have been reported.
Pseudogene
No human or mouse pseudogene known.
Proteins
Note
p38delta (MAPK13), also known as Stress-activated protein kinase 4 (SAPK4) belongs to the p38 subfamily of MAPKs. The p38MAPK subfamily is composed by four members encoded by different genes, which share high sequence homologues and are designated as p38alpha (MAPK14, or SAPK2a), p38beta (MAPK11 or SAPK2b), p38gamma (MAPK12 or SAPK3) and p38delta (MAPK13 or SAPK4). They are about 60% identical in their amino acid sequence but differ in their expression patterns, substrate specificities and sensitivities to chemical inhibitors (Iñesta-Vaquera et al., 2008). All p38 MAPKs are strongly activated in vivo by environmental stresses and inflammatory cytokines, and less by serum and growth factors.

Schematic representation of the p38delta (MAPK13) protein structure. Kinase Domain, catalytic kinase domain; TGY, sequence motif containing the regulatory phosphorylation residues.
Description
p38delta (MAPK13) is a Serine/Threonine protein kinase of 365 amino acids with a predicted molecular mass of 40 kDa. It possesses the conserved amino acid domains (I-XI) characteristic of protein kinases (Goedert et al., 1997). The Thr180 and Tyr182 residues in subdomain VIII are in an equivalent position to the TXY sequence in known MAPKs. The activation of p38delta (MAPK13) occurs via dual phosphorilation of its TGY motif, in the activation loop, by MKK3 and MKK6, although it is preferentially activated by MKK3 in mouse embryonic fibroblasts (Remy et al., 2009).
Expression
p38delta (MAPK13) mRNA is widely expressed with high levels of expression in testes, pancreas, kidney and small intestine.
Localisation
p38delta (MAPK13) localizes to the cytoplasm and nucleus of cultured cells.
Function
p38delta (MAPK13) phosphorylates typical p38 MAPK substrates such as the transcription factors ATF2, Elk-1 or SAP1. However, it cannot phosphorylate MAPKAPK2 or MAPKAPK3, which are good substrates for other p38 MAPK isoforms (Cuenda et al., 1997; Goedert et al., 1997). p38delta possibly plays a role in cytoskeleton regulation as it has been reported to phosphorylate the cytoplasmic protein stathmin, which has been linked to regulation of microtubule dynamics (Parker et al., 1998). Microtubule-associated protein Tau is another protein substrate of p38delta (Goedert et al., 1997; Feijoo et al., 2005; Yoshida and Goedert, 2006). In addition p38delta plays a role in the regulation of protein translation by phosphorylating and inactivating the eukaryotic elongation factor 2 (eEF2) kinase (Knebel et al., 2001; Knebel et al., 2002). p38delta also plays a key role in the regulation of insulin secretion as well as in the survival of pancreatic beta cells, since p38delta catalyzes an inhibitory phosphorylation of the protein kinase D1 (PDK1), which controls insuline exocytosis in pancreatic beta cells (Sumara et al., 2009). p38delta has been suggested to play an important role in inducing keratinocyte differentiation by regulating the expression of involucrin, which is a protein expressed during keratinocyte differentiation (Eckert et al., 2003). Activation of exogenously expressed p38delta by differentiation-inducing agents such as a bioactive green tea polyphenol (EGCG), okadaic acid (OA) or the phorbol ester TPA, correlated with increased involucrin promoter activity in keratinocytes via increased activity at AP1, Sp1 and C/EBP sites (Balasubramanian et al., 2002; Efimova et al., 2003). The mechanisms by which p38delta may regulates keratinocyte differentiation is still unknown, although it has been reported that in keratinocytes expressing exogenous p38delta this forms a complex with ERK1/ERK2 (Efimova et al., 2003; Eckert et al., 2004). Additional data supporting the idea that p38delta may play a role in keratinocyte differentiation come from a study carried out in lesional psoriasis skin (Johansen et al., 2005). It has been shown that the activity of p38alpha, p38beta and p38delta are augmented in lesional psoriasis skin compared with nonlesional psoriasis skin (Johansen et al., 2005). Alternatively, it has been also claimed that p38delta may have a dual role in keratinocytes contributing not only to the differentiation process, but also to their apoptosis in a PKCdelta dependent manner, and in response to OA or H2O2 (Efimova et al., 2004; Kraft et al., 2007).
Homology
p38delta (MAPK13) shows 70% identity with p38gamma (MAPK12), 60% sequence identity with p38alpha (MAPK14) and p38beta (MAPK11), 45% identity with HOG1 from S. cerevisiae, 47% identity with human SAP kinase-1 (JNK1) and 42% identity with p42 MAPkinase (ERK2).
Implicated in
Entity name
Skin cancer
Oncogenesis
It has been suggested that p38delta functions as positive regulator of skin tumorogenesis by promoting cell proliferation and tumor development in epidermis (Schindler et al., 2009).
Entity name
Cholangiocarcinoma
Oncogenesis
p38delta may serve as a diagnostic marker for expression cholangiocarcinoma (CC), since its expression is upregulated in CC relative to hepatocellularcarcinoma (HCC) and to normal biliary tract tissue (Li-Sher et al., 2009). It has been suggested that p38delta is important for motility and invasion of CC cells (Li-Sher et al., 2009).
Entity name
Malignant Pleural Mesothelioma
Oncogenesis
MAPK13 gene is hypermethylated in Malignant Pleural Mesothelioma (MPM) cell lines (Goto et al., 2009).
Entity name
Alzheimer disease
Note
The protein Tau is a good in vitro substrate for the p38 isoforms p38delta and p38gamma, and its phosphorylation by these two enzymes results in a reduction in its ability to promote microtubule assembly (Goedert et al., 1997b; Feijoo et al., 2005). Moreover, overexpression of p38gamma in neuroblastoma, induces Tau phosphorylation which correlates with a decrease on Tau associated to the cytoskeleton and an increase of soluble Tau (Jenkins et al., 2000). It has been reported as well that p38delta is the major Tau kinase in neuroblastoma in response to osmotic shock (Feijoo et al., 2005) and that the p38MAPK activator, MKK6, has also been found to be active in neurodegenerative diseases (Zhu et al., 2001). Moreover, oxidant agents implicated in Alzheimers disease can cause hyperphosphorylation in rat brain and also induce the activation of p38delta, indicating that this kinase may be involved in Tau phosphorylation (Yin et al., 2006). On the other hand, it has been shown using phosphospecific antibodies that p38MAPKs phosphorylate Tau on residues phosphorylated in a Tau obtained from patients suffering Alzheimers disease (Goedert et al., 1997b; Feijoo et al., 2005).
Entity name
Diabetes type 2 (diabetes mellitus)
Note
p38delta plays a key role in the regulation of insulin secretion as well as in the survival of pancreatic beta cells (Sumara et al., 2009).
Article Bibliography
| Pubmed ID | Last Year | Title | Authors |
|---|---|---|---|
| 11698415 | 2002 | Green tea polyphenol stimulates a Ras, MEKK1, MEK3, and p38 cascade to increase activator protein 1 factor-dependent involucrin gene expression in normal human keratinocytes. | Balasubramanian S et al |
| 9029150 | 1997 | Activation of stress-activated protein kinase-3 (SAPK3) by cytokines and cellular stresses is mediated via SAPKK3 (MKK6); comparison of the specificities of SAPK3 and SAPK2 (RK/p38). | Cuenda A et al |
| 17481747 | 2007 | p38 MAP-kinases pathway regulation, function and role in human diseases. | Cuenda A et al |
| 15313409 | 2004 | Antioxidants regulate normal human keratinocyte differentiation. | Eckert RL et al |
| 12713588 | 2003 | p38 Mitogen-activated protein kinases on the body surface--a function for p38 delta. | Eckert RL et al |
| 15340077 | 2004 | Protein kinase Cdelta regulates keratinocyte death and survival by regulating activity and subcellular localization of a p38delta-extracellular signal-regulated kinase 1/2 complex. | Efimova T et al |
| 15632108 | 2005 | Evidence that phosphorylation of the microtubule-associated protein Tau by SAPK4/p38delta at Thr50 promotes microtubule assembly. | Feijoo C et al |
| 9218798 | 1997 | Activation of the novel stress-activated protein kinase SAPK4 by cytokines and cellular stresses is mediated by SKK3 (MKK6); comparison of its substrate specificity with that of other SAP kinases. | Goedert M et al |
| 9199504 | 1997 | Phosphorylation of microtubule-associated protein tau by stress-activated protein kinases. | Goedert M et al |
| 19887624 | 2009 | Epigenetic profiles distinguish malignant pleural mesothelioma from lung adenocarcinoma. | Goto Y et al |
| 10620503 | 2000 | Modulation of tau phosphorylation and intracellular localization by cellular stress. | Jenkins SM et al |
| 15656798 | 2005 | The mitogen-activated protein kinases p38 and ERK1/2 are increased in lesional psoriatic skin. | Johansen C et al |
| 12171600 | 2002 | Stress-induced regulation of eukaryotic elongation factor 2 kinase by SB 203580-sensitive and -insensitive pathways. | Knebel A et al |
| 11500363 | 2001 | A novel method to identify protein kinase substrates: eEF2 kinase is phosphorylated and inhibited by SAPK4/p38delta. | Knebel A et al |
| 17256148 | 2007 | Activation of PKCdelta and p38delta MAPK during okadaic acid dependent keratinocyte apoptosis. | Kraft CA et al |
| 9731215 | 1998 | Identification of stathmin as a novel substrate for p38 delta. | Parker CG et al |
| 20004242 | 2010 | Differential activation of p38MAPK isoforms by MKK6 and MKK3. | Remy G et al |
| 19458068 | 2009 | p38delta Mitogen-activated protein kinase is essential for skin tumor development in mice. | Schindler EM et al |
| 19135240 | 2009 | Regulation of PKD by the MAPK p38delta in insulin secretion and glucose homeostasis. | Sumara G et al |
| 19816939 | 2010 | p38delta/MAPK13 as a diagnostic marker for cholangiocarcinoma and its involvement in cell motility and invasion. | Tan FL et al |
| 19629069 | 2009 | Signal integration by JNK and p38 MAPK pathways in cancer development. | Wagner EF et al |
| 16879317 | 2006 | Melatonin arrests peroxynitrite-induced tau hyperphosphorylation and the overactivation of protein kinases in rat brain. | Yin J et al |
| 16987243 | 2006 | Sequential phosphorylation of tau protein by cAMP-dependent protein kinase and SAPK4/p38delta or JNK2 in the presence of heparin generates the AT100 epitope. | Yoshida H et al |
| 11677259 | 2001 | Activation of MKK6, an upstream activator of p38, in Alzheimer's disease. | Zhu X et al |
Other Information
Locus ID:
NCBI: 5603
MIM: 602899
HGNC: 6875
Ensembl: ENSG00000156711
Variants:
dbSNP: 5603
ClinVar: 5603
TCGA: ENSG00000156711
COSMIC: MAPK13
RNA/Proteins
| Gene ID | Transcript ID | Uniprot |
|---|---|---|
| ENSG00000156711 | ENST00000211287 | O15264 |
| ENSG00000156711 | ENST00000211287 | A0A024RD04 |
| ENSG00000156711 | ENST00000373759 | Q5R3E6 |
| ENSG00000156711 | ENST00000373766 | O15264 |
Expression (GTEx)
Pathways
Protein levels (Protein atlas)
PharmGKB
| Entity ID | Name | Type | Evidence | Association | PK | PD | PMIDs |
|---|---|---|---|---|---|---|---|
| PA284 | MAP2K7 | Gene | Pathway | associated | 20124951 | ||
| PA30584 | MAP2K1 | Gene | Pathway | associated | 20124951 | ||
| PA30587 | MAP2K2 | Gene | Pathway | associated | 20124951 | ||
| PA30588 | MAP2K3 | Gene | Pathway | associated | 20124951 | ||
| PA30589 | MAP2K4 | Gene | Pathway | associated | 20124951 | ||
| PA30590 | MAP2K5 | Gene | Pathway | associated | 20124951 | ||
| PA30591 | MAP2K6 | Gene | Pathway | associated | 20124951 | ||
| PA7000 | sorafenib | Chemical | Pathway | associated | 20124951 |
References
| Pubmed ID | Year | Title | Citations |
|---|---|---|---|
| 31695024 | 2019 | MKK3 sustains cell proliferation and survival through p38DELTA MAPK activation in colorectal cancer. | 13 |
| 31695024 | 2019 | MKK3 sustains cell proliferation and survival through p38DELTA MAPK activation in colorectal cancer. | 13 |
| 29287762 | 2018 | The p38 Mitogen-Activated Protein Kinase Critically Regulates Human Keratinocyte Inflammasome Activation. | 15 |
| 29344643 | 2018 | MicroRNA-23a-5p regulates osteogenic differentiation of human bone marrow-derived mesenchymal stem cells by targeting mitogen-activated protein kinase-13. | 12 |
| 29661910 | 2018 | Myeloid cell deficiency of p38γ/p38δ protects against candidiasis and regulates antifungal immunity. | 14 |
| 29930081 | 2018 | p38δ MAPK regulates aggresome biogenesis by phosphorylating SQSTM1 in response to proteasomal stress. | 11 |
| 29979672 | 2018 | p38α blocks brown adipose tissue thermogenesis through p38δ inhibition. | 19 |
| 29287762 | 2018 | The p38 Mitogen-Activated Protein Kinase Critically Regulates Human Keratinocyte Inflammasome Activation. | 15 |
| 29344643 | 2018 | MicroRNA-23a-5p regulates osteogenic differentiation of human bone marrow-derived mesenchymal stem cells by targeting mitogen-activated protein kinase-13. | 12 |
| 29661910 | 2018 | Myeloid cell deficiency of p38γ/p38δ protects against candidiasis and regulates antifungal immunity. | 14 |
| 29930081 | 2018 | p38δ MAPK regulates aggresome biogenesis by phosphorylating SQSTM1 in response to proteasomal stress. | 11 |
| 29979672 | 2018 | p38α blocks brown adipose tissue thermogenesis through p38δ inhibition. | 19 |
| 27992079 | 2017 | Expression of claudin-11 by tumor cells in cutaneous squamous cell carcinoma is dependent on the activity of p38δ. | 9 |
| 28783172 | 2017 | P38 delta MAPK promotes breast cancer progression and lung metastasis by enhancing cell proliferation and cell detachment. | 35 |
| 27992079 | 2017 | Expression of claudin-11 by tumor cells in cutaneous squamous cell carcinoma is dependent on the activity of p38δ. | 9 |
Citation
Maria Isabel Cerezo-Guisado ; Ana Cuenda
MAPK13 (mitogen-activated protein kinase 13)
Atlas Genet Cytogenet Oncol Haematol. 2009-12-01
Online version: http://atlasgeneticsoncology.org/gene/41291/mapk13
