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MYB (v-myb myeloblastosis viral oncogene homolog (avian))

Identity

Other namesC-myb
Cmyb
OTTHUMP00000017258
c-myb
c-myb10A_CDS
c-myb13A_CDS
c-myb14A_CDS
c-myb8B_CDS
c-myb_CDS
efg
HGNC (Hugo) MYB
LocusID (NCBI) 4602
Location 6q23.3
Location_base_pair Starts at 135502453 and ends at 135540311 bp from pter ( according to hg19-Feb_2009)  [Mapping]
Local_order Centromere SGK1 - ALDH8A1 - HBS1L - MYB - AHI1 - PDE7B - FAM54A telomere.

DNA/RNA

Note MYB was identified as the cellular homologue of v-myb, an oncogene found in two avian retroviruses (Avian Myeloblastosis Virus (AMV) and E26), which induce myeloblastic leukaemia and a mixed myeloid/erythroid leukaemia, respectively, in chickens.
 
Description The MYB gene spans 37.85 kb on the long arm of chromosome 6 and is transcribed in the centromere-to-telomere orientation.
Transcription Multiple splicing variants of ~2.9 to 3.6 kb encode a series of MYB proteins with identical DNA binding domains but unique C-terminal domains. The best characterized MYB variant is p89 with additional exon 9B.
The first intron contains an elongation attenuation region (Atn) which is important in regulating transcription of MYB.

Protein

 
Description The MYB protein consists of three distinct functional domains: an N-terminal helix-turn-helix (HTH)-type DNA binding domain (DBD), a centrally located trans-activation domain (TAD) and a C-terminal negative regulatory domain (NRD).
The DBD consists of three tandem 52 amino acid repeat termed R1, R2 and R3, which are involved in recognition and binding to the consensus sequence PyAACT/GG, known as the MYB binding site (MBS). MYB's trans-activation of its target genes requires the TAD. The NRD negatively regulates the trans-activating and transforming capacity of MYB. Several motifs within the NRD have been identified, including a Heptad Leucine Repeat (HLR) and a highly conserved EVES motif. Disruption of the HLR motif results in enhancement of MYB's trans-activating and transforming capacities. The EVES motif is also involved in negative regulation of MYB's activity by mediating interactions between the N-terminus and the C-terminus of the MYB protein.
MYB protein is subject to post-translational modifications, including ubiquitination, sumoylation, acetylation and phosphorylation.
Expression MYB is expressed predominantly in immature progenitor cells of all haemopoietic lineages and these levels decrease as the cells progress towards terminal differentiation, although in differentiated T cells, MYB can be up-regulated upon activation.
Besides the haemopoietic system, MYB expression is also detected in colonic crypts and neurogenic niches.
MYB is highly expressed in almost all leukaemias. Overexpression of MYB is also detected in some solid tumors, such as breast cancer and colon cancer.
Localisation MYB is localized to the nucleus.
Function MYB mostly operates as a transcriptional activator. It binds to its cognate binding site (MYB binding site MBS; consensus A/C A A C G/T G) on target genes and regulates their expression.
MYB is essential for the establishment of definitive haemopoiesis; as such, myb-/- mice die of anoxia by embryonic day 15. Conditional knockout mice have shown that myb is required at different stages of differentiation of the T and B lymphoid lineages. MYB is also reported to play a role in maintaining the haemopoietic stem cell pool. Interestingly, hypomorphic myb alleles result in an increase in platelet numbers in mouse models.
MYB is involved in maintaining the proliferation of progenitor cells. Knockdown of MYB in leukaemic cells and estrogen receptor positive breast cancer cells, where it is highly expressed, significantly slows down cell proliferation. Overexpressed or activated MYB suppresses normal differentiation and promotes leukaemic transformation. However, MYB also activates a number of haemopoietic-specific genes.
Homology The MYB gene family contains the other two closely related members, MYBL1 (also known as A-MYB) and MYBL2 (also known as B-MYB).
The DBD is highly conserved between mammalian, chicken and drosophila MYB proteins, as well as MYBL1 and MYBL2. The MYB DBD also shares homology with other proteins, such as telomeric repeat binding factor -1, -2 (TRF1, TRF2) and cyclin D binding myb-like transcription factor 1 (DMTF1).

Implicated in

Entity T-cell acute lymphoblastic leukaemia
Disease Translocation involving MYB and the T-cell receptor beta (TCRbeta) locus t(6;7)(q23;q34) and somatic genomic duplications at the C-MYB locus.
Cytogenetics Molecular mapping of the chromosomal breakpoints show 2 discrete breakpoint clusters at 6q23.3: One located 5kb telomeric, 3' of the C-MYB gene, and the other 50kb more telomeric. Another gene (AHI1) was located in the vicinity of the t(6;7) breakpoints and was disrupted in some cases. In all cases, the translocation placed C-MYB in the vicinity of the TCRbeta regulatory sequence.
Oncogenesis The abnormal regulation of C-MYB expression in this case confers a block of differentiation and continued proliferative capacity leading to its oncogenicity.
  
Entity Acute myeloid leukaemia
Note MYB is over-expressed in most human acute myeloid and lymphoid leukaemias. Several studies using antisense oligonucleotides and dominant negative forms of MYB have shown that MYB activity is essential for continued proliferation of AML and CML cells. Also, AML and CML cells are more sensitive to inhibition of MYB than their normal counterparts.
  
Entity AML that have MYST3-linked abnormalities
Disease Genomic gain of the MYB locus.
Prognosis MYST3-linked AMLs have been shown to be associated with poor prognosis.
Oncogenesis A gain of the MYB locus at 6q23 was recurrently detected in AMLs that have MYST3-translocations. A consequent increase in MYB mRNA levels was also reported.
  
Entity Colorectal cancer
Prognosis MYB is over-expressed in >80% of colorectal cancers. MYB expression correlates with poor prognosis for patients with colorectal cancer.
Oncogenesis Robust mRNA expression and MYB mRNA amplifications were identified in colorectal cancer cell lines. Protein overexpression is a feature of these cell lines and primary cancers. Mutations in the first intron of MYB in the Atn region that regulates transcriptional elongation have been reported in some colorectal cancer cell lines and primary cancers.
  
Entity Breast cancers
Note MYB over-expression.
Prognosis Since Myb over-expression is closely related to estrogen receptor positivity in breast cancers, prognosis is generally positive. This is due to the less severe nature of ER+ breast tumours and the availability of established therapeutics.
Oncogenesis 64% of breast cancers express MYB, which also strongly correlates with ERalpha positivity.
  
Entity Breast cancer harboring BRCA1 mutations
Note MYB amplification is seen in 29% of tumours in women with BRCA1 mutations.
Disease MYB amplification.
  

Breakpoints

 

External links

Nomenclature
HGNC (Hugo)MYB   7545
Entrez_Gene (NCBI)MYB  4602  v-myb myeloblastosis viral oncogene homolog (avian)
Cards
AtlasMYBID41466ch6q23
GeneCards (Weizmann)MYB
Ensembl (Hinxton)ENSG00000118513 [Gene_View]  chr6:135502453-135540311 [Contig_View]  MYB [Vega]
AceView (NCBI)MYB
Genatlas (Paris)MYB
SOURCE (Stanford)NM_001130172 NM_001130173 NM_001161656 NM_001161657 NM_001161658 NM_001161659 NM_001161660 NM_005375
Genomic and cartography
GoldenPath (UCSC)MYB  -  6q23.3   chr6:135502453-135540311 +  6q22-q23   [Description]    (hg19-Feb_2009)
EnsemblMYB - 6q22-q23 [CytoView]
Mapping of homologs : NCBIMYB [Mapview]
OMIM189990   
Gene and transcription
Genbank (Entrez)AF104863 AJ606317 AJ606318 AJ606319 AJ606320
RefSeq transcript (SRS)NM_001130172 NM_001130173 NM_001161656 NM_001161657 NM_001161658 NM_001161659 NM_001161660 NM_005375
RefSeq transcript (Entrez)NM_001130172 NM_001130173 NM_001161656 NM_001161657 NM_001161658 NM_001161659 NM_001161660 NM_005375
RefSeq genomic (SRS)AC_000138 NC_000006 NC_018917 NG_012330 NT_025741 NW_001838990 NW_004078028
RefSeq genomic (Entrez)AC_000138 NC_000006 NC_018917 NG_012330 NT_025741 NW_001838990 NW_004078028
Consensus coding sequences : CCDS (NCBI)MYB
Cluster EST : UnigeneHs.606320 [ SRS ] Hs.606320 [ NCBI ]
CGAP (NCI)Hs.606320
Alternative Splicing : Fast-db (Paris)GSHG0026056
Alternative Splicing GalleryENSG00000118513
Gene ExpressionMYB [ NCBI-GEO ]   MYB [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP10242 (SRS) P10242 (Uniprot)
NextProtP10242
With graphics : InterProP10242
Splice isoforms : SwissVarP10242(Swissvar)
Domaine pattern : Prosite (SRS)HTH_MYB (PS51294)   
Domaine pattern : Prosite (Expaxy)HTH_MYB (PS51294)   
Domains : Interpro (SRS)C-myb_C    Homeodomain-like    Myb_dom    SANT/Myb    Tscrpt_reg_Wos2-domain   
Domains : Interpro (EBI)C-myb_C    Homeodomain-like    Myb_dom    SANT/Myb    Tscrpt_reg_Wos2-domain   
Related proteins : CluSTrP10242
Domain families : Pfam (SRS)Cmyb_C (PF09316)    LMSTEN (PF07988)    Myb_DNA-binding (PF00249)   
Domain families : Pfam (Sanger)Cmyb_C (PF09316)    LMSTEN (PF07988)    Myb_DNA-binding (PF00249)   
Domain families : Pfam (NCBI)pfam09316    pfam07988    pfam00249   
Domain families : Smart (EMBL)SANT (SM00717)  
DMDM4602
Blocks (Seattle)P10242
Human Protein AtlasENSG00000118513
HPRD01810
IPIIPI00420046   IPI00471985   IPI00219496   IPI00219497   IPI00983514   IPI00749442   IPI00219499   IPI00982234   IPI00973990   IPI00513778   IPI00981266   IPI00977216   IPI00979947   IPI00975856   IPI00985239   IPI00249282   IPI00930457   IPI00976785   IPI00976312   IPI00976204   IPI00977522   IPI00930729   IPI00980683   IPI00980880   IPI00978517   IPI00984959   IPI00979912   IPI00981518   IPI00930645   IPI00983957   IPI00983204   
Protein Interaction databases
DIP (DOE-UCLA)P10242
IntAct (EBI)P10242
FunCoupENSG00000118513
REACTOMEMYB
Protein Interaction Database4602
BioGRIDMYB
InParanoidP10242
Interologous Interaction database P10242
IntegromeDBMYB
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MYB
SNP (GeneSNP Utah)MYB
SNP : HGBaseMYB
Genetic variants : HAPMAPMYB
Cancer Gene: CensusMYB 
Somatic Mutations in Cancer : COSMICMYB 
CONAN: Copy Number AnalysisMYB 
Rearrangement : COSMICMYB [6q23.3]  -  NFIB [9p23]
Rearrangement : COSMICNFIB [9p23]  -  MYB [6q23.3]
Translocation Breakpoints in Cancer : TICdbMYB 
Mutations and Diseases : HGMDMYB
OMIM189990   
GENETests189990   
Disease Genetic AssociationMYB
Huge Navigator MYB [HugePedia]  MYB [HugeCancerGEM]
Genomic VariantsMYB  MYB [DGVbeta]
snp3D : Map Gene to Disease4602
General knowledge
Homologs : HomoloGeneMYB
Homology/Alignments : Family Browser (UCSC)MYB
Phylogenetic Trees/Animal Genes : TreeFamMYB
Chemical/Protein Interactions : CTD4602
Chemical/Pharm GKB GenePA31345
Clinical trialMYB
Cancer Resource (Charite)ENSG00000118513
Ontology : AmiGOG1/S transition of mitotic cell cycle  negative regulation of transcription from RNA polymerase II promoter  in utero embryonic development  DNA binding  chromatin binding  sequence-specific DNA binding transcription factor activity  protein binding  chromatin remodeling  transcription, DNA-dependent  regulation of transcription, DNA-dependent  calcium ion transport  blood coagulation  nuclear matrix  B cell differentiation  positive regulation of T-helper cell differentiation  negative regulation of transcription, DNA-dependent  positive regulation of transcription, DNA-dependent  positive regulation of transcription, DNA-dependent  positive regulation of transcription from RNA polymerase II promoter  positive regulation of transcription from RNA polymerase II promoter  thymus development  embryonic digestive tract development  homeostasis of number of cells  positive regulation of histone H3-K4 methylation  positive regulation of histone H3-K9 methylation  
Ontology : EGO-EBIG1/S transition of mitotic cell cycle  negative regulation of transcription from RNA polymerase II promoter  in utero embryonic development  DNA binding  chromatin binding  sequence-specific DNA binding transcription factor activity  protein binding  chromatin remodeling  transcription, DNA-dependent  regulation of transcription, DNA-dependent  calcium ion transport  blood coagulation  nuclear matrix  B cell differentiation  positive regulation of T-helper cell differentiation  negative regulation of transcription, DNA-dependent  positive regulation of transcription, DNA-dependent  positive regulation of transcription, DNA-dependent  positive regulation of transcription from RNA polymerase II promoter  positive regulation of transcription from RNA polymerase II promoter  thymus development  embryonic digestive tract development  homeostasis of number of cells  positive regulation of histone H3-K4 methylation  positive regulation of histone H3-K9 methylation  
Other databases
Probes
Litterature
PubMed168 Pubmed reference(s) in Entrez
PubGeneMYB
iHOPMYB

Bibliography

Three new types of viral oncogene of cellular origin specific for haematopoietic cell transformation.
Roussel M, Saule S, Lagrou C, Rommens C, Beug H, Graf T, Stehelin D.
Nature. 1979 Oct 11;281(5731):452-5.
PMID 226888
 
Expression of cellular homologues of retroviral onc genes in human hematopoietic cells.
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Viral myb oncogene encodes a sequence-specific DNA-binding activity.
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Nature. 1988 Oct 27;335(6193):835-7.
PMID 3185713
 
Delineation of three functional domains of the transcriptional activator encoded by the c-myb protooncogene.
Sakura H, Kanei-Ishii C, Nagase T, Nakagoshi H, Gonda TJ, Ishii S.
Proc Natl Acad Sci U S A. 1989 Aug;86(15):5758-62.
PMID 2668947
 
Strong association between c-myb and oestrogen-receptor expression in human breast cancer.
Guerin M, Sheng ZM, Andrieu N, Riou G.
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PMID 2181374
 
How can oncogenic transcription factors cause cancer: a critical review of the myb story.
Introna M, Golay J.
Leukemia. 1999 Sep;13(9):1301-6. (REVIEW)
PMID 10482978
 
MYB oncogene amplification in hereditary BRCA1 breast cancer.
Kauraniemi P, Hedenfalk I, Persson K, Duggan DJ, Tanner M, Johannsson O, Olsson H, Trent JM, Isola J, Borg A.
Cancer Res. 2000 Oct 1;60(19):5323-8.
PMID 11034064
 
Suppressor screen in Mpl-/- mice: c-Myb mutation causes supraphysiological production of platelets in the absence of thrombopoietin signaling.
Carpinelli MR, Hilton DJ, Metcalf D, Antonchuk JL, Hyland CD, Mifsud SL, Di Rago L, Hilton AA, Willson TA, Roberts AW, Ramsay RG, Nicola NA, Alexander WS.
Proc Natl Acad Sci U S A. 2004 Apr 27;101(17):6553-8. Epub 2004 Apr 7.
PMID 15071178
 
c-Myb and p300 regulate hematopoietic stem cell proliferation and differentiation.
Sandberg ML, Sutton SE, Pletcher MT, Wiltshire T, Tarantino LM, Hogenesch JB, Cooke MP.
Dev Cell. 2005 Feb;8(2):153-66.
PMID 15691758
 
Mutations in the MYB intron I regulatory sequence increase transcription in colon cancers.
Hugo H, Cures A, Suraweera N, Drabsch Y, Purcell D, Mantamadiotis T, Phillips W, Dobrovic A, Zupi G, Gonda TJ, Iacopetta B, Ramsay RG.
Genes Chromosomes Cancer. 2006 Dec;45(12):1143-54.
PMID 16977606
 
The C-MYB locus is involved in chromosomal translocation and genomic duplications in human T-cell acute leukemia (T-ALL), the translocation defining a new T-ALL subtype in very young children.
Clappier E, Cuccuini W, Kalota A, Crinquette A, Cayuela JM, Dik WA, Langerak AW, Montpellier B, Nadel B, Walrafen P, Delattre O, Aurias A, Leblanc T, Dombret H, Gewirtz AM, Baruchel A, Sigaux F, Soulier J.
Blood. 2007 Aug 15;110(4):1251-61. Epub 2007 Apr 23.
PMID 17452517
 
Critical roles for c-Myb in hematopoietic progenitor cells.
Greig KT, Carotta S, Nutt SL.
Semin Immunol. 2008 Aug;20(4):247-56. Epub 2008 Jun 26. (REVIEW)
PMID 18585056
 
Alternative RNA splicing produces multiple forms of c-Myb with unique transcriptional activities.
O'Rourke JP, Ness SA.
Mol Cell Biol. 2008 Mar;28(6):2091-101. Epub 2008 Jan 14.
PMID 18195038
 
MYB function in normal and cancer cells.
Ramsay RG, Gonda TJ.
Nat Rev Cancer. 2008 Jul;8(7):523-34. (REVIEW)
PMID 18574464
 
Genome profiling of acute myelomonocytic leukemia: alteration of the MYB locus in MYST3-linked cases
Murati A, Gervais C, Carbuccia N, Finetti P, Cervera N, Adelaide J, Struski S, Lippert E, Mugneret F, Tigaud I, Penther D, Bastard C, Poppe B, Speleman F, Baranger L, Luquet I, Cornillet-Lefebvre P, Nadal N, Nguyen-Khac F, Perot C, Olschwang S, Bertucci F, Chaffanet M, Lessard M, Mozziconacci MJ, Birnbaum D; Groupe Francophone de Cytogenetique Hematologique.
Leukemia. 2009 Jan;23(1):85-94. Epub 2008 Sep 25.
PMID 18818702
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written02-2009Liang Zhao, Diwakar R Pattabiraman, Thomas J Gonda
Diamantina Institute for Cancer, Immunology and Metabolic Medicine, University of Queensland, Australia

Citation

This paper should be referenced as such :
Zhao L, Pattabiraman DR, Gonda TJ . MYB (v-myb myeloblastosis viral oncogene homolog (avian)). Atlas Genet Cytogenet Oncol Haematol. February 2009 .
URL : http://AtlasGeneticsOncology.org/Genes/MYBID41466ch6q23.html

This paper is referenced by INIST as such :
http://documents.irevues.inist.fr/bitstream/2042/44658/1/02-2009-MYBID41466ch6q23.pdf   [ Bibliographic record ]

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