AATF (Apoptosis Antagonizing Transcription Factor)
2006-12-01 Deepak Kaul  , Amit Khanna   AffiliationDepartment of Expt. Medicine &Biotechnology, Postgraduate Institute of Medical Education &Research, Chandigarh- 160 012, India
Identity
HGNC
LOCATION
17q12
LOCUSID
ALIAS
BFR2,CHE-1,CHE1,DED
FUSION GENES
DNA/RNA
Note
Protein AATF (Apoptosis-antagonizing transcription factor) (Rb-binding protein Che-1). Total gene size being 107.996 kb and having transcribed region of 2.141 kb it codes for 561 amino acids.
Description
Spans on 107.996 kb on genomic fragment and contains 12 exons.
Transcription
2023 bp mRNA
Pseudogene
No pseudogenes for AATF are known.
Proteins
Note
561 amino acids long protein contains POLR2J binding site at 273-315 amino acids, RB1 binding site at 316-372 amino acids, RB1 and SP1 binding site at 373-472 amino acids and Glu-rich region at 96-195 amino acids.
Description
AATF was identified as an interacting partner with MAP3K12/DLK which happens to be a protein kinase known to be involved in the induction of cell apoptosis. Its protein contains a leucine zipper, which is a characteristic motif of transcription factors, and was shown to exhibit strong transactivation activity when fused to Gal4 DNA binding domain. Overexpression of this gene interfered with MAP3K12 induced apoptosis.
Expression
Ubiquitously expressed. Expressed at high levels in brain, heart, kidney, placenta, thymus and moderate levels in blood mononuclear cells.
Localisation
Nucleus; nucleolus.
Function
It functions as a general inhibitor of the histone deacetylase HDAC1. Binding to the pocket region of RB1 may displace HDAC1 from RB1/E2F complexes, leading to activation of E2F target genes and cell cycle progression. Conversely, displacement of HDAC1 from SP1 bound to the CDKN1A promoter leads to increased expression of this CDK inhibitor and blocks cell cycle progression. Also antagonizes PAWR mediated induction of aberrant amyloid peptide production in Alzheimer disease (presenile and senile dementia), although the molecular basis for this phenomenon has not been described to date.
Mutations
Note
Several polymorphisms have been identified and but none of them has shown any association with any disease.
Implicated in
Entity name
Leukemia
Note
AATF plays a major role in immortalization of leukemic cells through up-regulation of Bcl2 gene expression.
Disease
Haematopoitic malignancies

AATF dependent cross talk between cellular apoptosis and proliferation.
Entity name
AIDS
Note
HIV-1 encodes a specific miRNA that has the inherent capacity to cleave 12th exon of AATF gene resulting in truncated AATF gene product which is destined to undergo degradation. Down-regulation of AATF gene expression is always accompanied by significant reduction in cell viability and down-regulation of gene coding for dicer which plays a crucial role in providing immunity at the nucleic acid level.
Disease
Immunodeficiency, Lymphoadenopathy, Kaposis sarcoma, AIDS dementia

HIV-1 encoded miRNA dependent AATF gene down-regulation and subsequent cell death.
Article Bibliography
| Pubmed ID | Last Year | Title | Authors |
|---|---|---|---|
| 12450794 | 2002 | Che-1 affects cell growth by interfering with the recruitment of HDAC1 by Rb. | Bruno T et al |
| 14761944 | 2004 | TSG101 interacts with apoptosis-antagonizing transcription factor and enhances androgen receptor-mediated transcription by promoting its monoubiquitination. | Burgdorf S et al |
| 12847090 | 2003 | Che-1 arrests human colon carcinoma cell proliferation by displacing HDAC1 from the p21WAF1/CIP1 promoter. | Di Padova M et al |
| 17006618 | 2007 | Functional characterization of AATF transcriptome in human leukemic cells. | Kaul D et al |
Other Information
Locus ID:
NCBI: 26574
MIM: 608463
HGNC: 19235
Ensembl: ENSG00000275700
Variants:
dbSNP: 26574
ClinVar: 26574
TCGA: ENSG00000275700
COSMIC: AATF
RNA/Proteins
| Gene ID | Transcript ID | Uniprot |
|---|---|---|
| ENSG00000275700 | ENST00000610798 | A0A087WWS8 |
| ENSG00000275700 | ENST00000613840 | A0A087WW41 |
| ENSG00000275700 | ENST00000616434 | A0A087WTH8 |
| ENSG00000275700 | ENST00000619387 | Q9NY61 |
Expression (GTEx)
Pathways
Protein levels (Protein atlas)
References
| Pubmed ID | Year | Title | Citations |
|---|---|---|---|
| 37742722 | 2024 | HAX1 is a novel binding partner of Che-1/AATF. Implications in oxidative stress cell response. | 0 |
| 37742722 | 2024 | HAX1 is a novel binding partner of Che-1/AATF. Implications in oxidative stress cell response. | 0 |
| 34266450 | 2021 | CK2-mediated phosphorylation of Che-1/AATF is required for its pro-proliferative activity. | 3 |
| 34266450 | 2021 | CK2-mediated phosphorylation of Che-1/AATF is required for its pro-proliferative activity. | 3 |
| 32019955 | 2020 | AATF and SMARCA2 are associated with thyroid volume in Hashimoto's thyroiditis patients. | 6 |
| 32421830 | 2020 | Che-1/AATF binds to RNA polymerase I machinery and sustains ribosomal RNA gene transcription. | 7 |
| 32019955 | 2020 | AATF and SMARCA2 are associated with thyroid volume in Hashimoto's thyroiditis patients. | 6 |
| 32421830 | 2020 | Che-1/AATF binds to RNA polymerase I machinery and sustains ribosomal RNA gene transcription. | 7 |
| 30394550 | 2019 | A Regulatory Role of Apoptosis Antagonizing Transcription Factor in the Pathogenesis of Nonalcoholic Fatty Liver Disease and Hepatocellular Carcinoma. | 27 |
| 30610504 | 2019 | MicroRNA-663 antagonizes apoptosis antagonizing transcription factor to induce apoptosis in epithelial cells. | 3 |
| 30394550 | 2019 | A Regulatory Role of Apoptosis Antagonizing Transcription Factor in the Pathogenesis of Nonalcoholic Fatty Liver Disease and Hepatocellular Carcinoma. | 27 |
| 30610504 | 2019 | MicroRNA-663 antagonizes apoptosis antagonizing transcription factor to induce apoptosis in epithelial cells. | 3 |
| 29321668 | 2018 | AATF suppresses apoptosis, promotes proliferation and is critical for Kras-driven lung cancer. | 15 |
| 29367285 | 2018 | Che-1 is targeted by c-Myc to sustain proliferation in pre-B-cell acute lymphoblastic leukemia. | 17 |
| 29943642 | 2018 | A new baby in the c-Myc-directed transcriptional machinery: Che-1/AATF. | 1 |
Citation
Deepak Kaul ; Amit Khanna
AATF (Apoptosis Antagonizing Transcription Factor)
Atlas Genet Cytogenet Oncol Haematol. 2006-12-01
Online version: http://atlasgeneticsoncology.org/gene/534/aatf-(apoptosis-antagonizing-transcription-factor)
