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BOK (BCL2-related ovarian killer)

Identity

Other namesMtd (Matador)
BOKL
BCL2-like 9
BCL2L9
MGC4631
HGNC (Hugo) BOK
Location 2q37.3
Location_base_pair Starts at 242146865 and ends at 242162226 bp from pter ( according to hg18-Mar_2006)  [Mapping]
Local_order LOC728248 STK25 BOK THAP4 ATG4B

DNA/RNA

Description The gene encompasses 15,361 bp of DNA with 5 exons.
Transcription Alternative splicing results in expression of two mRNA variants. The full-length (Bok-L) mRNA comprises 2.6 kb with the 639 bp open reading frame. The truncated form (Bok-S) results from skipping of exon three and a deletion of 43 bp in the Bok-L coding region. It has been shown that transcription activity of the Bok gene depends on expression of p53 and can be directly regulated at the gene promoter level by E2F transcription factors during cell cycle progression.

Protein

Description A Bok transcript was initially isolated from a rat ovarian fusion cDNA library. Sequencing of this transcript has revealed that full-length BOK protein consists of 213 amino acids and contains three conserved BCL2 homology regions BH1, BH2, and BH3 in addition to a C-terminal transmembrane domain. BOK-S that results from the alternative splicing has its N-terminal BH3 domain part fused to the C-terminal part of the BH1 region. Using the yeast two-hybrid system, it has been demonstrated that, although the BH domains composition of BOK-L protein was similar to that of BAX and BAK, it interacted only with MCL-1, BHRF1, and BCL2A1/BFL-1 but not other anti-apoptotic multidomain BCL-2 family members.
Expression Bok mRNA was isolated from the ovarian cDNA library. Results of Northern blot analysis revealed high expression levels of Bok mRNA in the reproductive tissues, such as ovary, testis, and uterus. Using in situ hybridization the authors localized Bok mRNA in granulosa cells. However, Bok expression is also evident in other mammalian tissues, such as brain, liver, thymus, lung, heart, kidney intestinal epithelium and lymphoid tissues.
Localisation Intracellular localization of BOK protein remains to be clarified. Results of different studies suggest either its mitochondrial or cytosolic and nuclear localization.
Function BOK promotes both caspase-dependent and caspase-independent apoptosis at the level of mitochondria in various cell types by promoting the release of pro-apoptotic mitochondrial factors to the cell cytosol. Inhibition of BOK induction using siRNA markedly decreases p53-dependent cell death. However, a specific mechanism, by which BOK increases mitochondrial membrane permeability, remains unknown. Apoptosis induced by BOK overexpression cannot be inhibited by Bcl-2 or Bcl-XL suggesting a unique role for BOK in apoptosis. A recent report indicates that BOK may cooperate with a BH3-only member, NOXA in p53-dependent apoptosis induced by DNA damage in human neuroblastoma cells, where it substitutes for a function of pro-apoptotic BAX.
Homology Evolutionary conserved from fly to human.

Mutations

Note Unknown.

External links

Nomenclature
HGNC (Hugo)BOK   1087
Entrez_Gene (NCBI)BOK  666  BCL2-related ovarian killer
Cards
AtlasBOKID824ch2q37
GeneCards (Weizmann)BOK
Ensembl (Hinxton)ENSG00000176720 [Gene_View]  BOK [Vega]
AceView (NCBI)BOK
Genatlas (Paris)BOK
euGene (Indiana)666
SOURCE (Stanford)NM_032515
Gene Expression (Array Express) ENSG00000176720
Genomic and cartography
GoldenPath (UCSC)BOK  -  2q37.3   chr2:242146865-242162226 +  2q37.3   [Description]    (hg18-Mar_2006)
EnsemblBOK - 2q37.3 [CytoView]
Mapping of homologs : NCBIBOK [Mapview]
OMIM605404   
Gene and transcription
Gene : Genbank (Entrez)AF089746 AF174487 BC006203 BC017214 BG118500
Reference sequence (RefSeq transcript) :SRSNM_032515
Reference transcript : EntrezNM_032515
RefSeq genomic : SRSAC_000045 AC_000134 NC_000002 NT_005416 NW_001838874 NW_921618
RefSeq genomic : EntrezAC_000045 AC_000134 NC_000002 NT_005416 NW_001838874 NW_921618
Consensus coding sequences : CCDS NCBIBOK
Cluster EST : UnigeneHs.293753 [ SRS ] Hs.293753 [ NCBI ]
Alternative Splicing : Fast-db (Paris)16237
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtQ9UMX3 (SRS) Q9UMX3 (Expasy) Q9UMX3 (Uniprot)
With graphics : InterProQ9UMX3
Splice isoforms : VarSplice FASTAQ9UMX3(VarSplice FASTA)
Domaine pattern : Prosite (SRS)BCL2_FAMILY (PS50062)    BH1 (PS01080)    BH2 (PS01258)    BH3 (PS01259)    BH4_1 (PS01260)    BH4_2 (PS50063)   
Domain pattern : Prosite (Expaxy)BCL2_FAMILY (PS50062)    BH1 (PS01080)    BH2 (PS01258)    BH3 (PS01259)    BH4_1 (PS01260)    BH4_2 (PS50063)   
Domains : Interpro (SRS)BCL2_apoptsis    Bcl2_BH   
Domains : Interpro (EBI)BCL2_apoptsis    Bcl2_BH   
Related proteins : CluSTrQ9UMX3
Domain families : Pfam SRSBcl-2 (PF00452)   
Domain families : Pfam SangerBcl-2 (PF00452)   
Domain families : Pfam NCBIpfam00452   
Domain families : Smart EMBLBCL (SM00337)  
Blocks (Seattle)Q9UMX3
Crystal structure of protein : PDB SRS
Crystal structure of protein : PDBSum
Crystal structure of protein : IMB
Crystal structure of protein : PDB RSDB
HPRD05657
Protein Interaction databases
DIP (DOE-UCLA)Q9UMX3
IntAct (EBI)Q9UMX3
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIBOK
SNP : GeneSNP UtahBOK
SNP : HGBaseBOK
Genetic variants : HAPMAPBOK
Somatic Mutations in Cancer : COSMICBOK 
Mutations and Diseases : HGMDBOK
Hereditary diseases : OMIM605404   
Hereditary diseases : GENETests605404   
Diseases : Genetic AssociationBOK
General knowledge
Homologs : HomoloGeneBOK
Homology/Alignments : Family Browser UCSCBOK
Phylogenetic Trees/Animal Genes : TreeFamBOK
Chemical/Protein Interactions : CTD666
Keywords Ontology : AmiGOcellular_component  induction of apoptosis  regulation of apoptosis  protein dimerization activity  
Keywords Ontology : EGO-EBIcellular_component  induction of apoptosis  regulation of apoptosis  protein dimerization activity  
Pathways : BIOCARTA
Pathways : KEGG
Other databases
Probes
Probes : ImagenesBOK Related clones (RZPD - Berlin)
Literature
PubMed13 Pubmed reference(s) in Entrez
PubGeneBOK

Bibliography

Bok is a pro-apoptotic Bcl-2 protein with restricted expression in reproductive tissues and heterodimerizes with selective anti-apoptotic Bcl-2 family members.
Hsu SY, Kaipia A, McGee E, Lomeli M, Hsueh AJ
Proceedings of the National Academy of Sciences of the United States of America. 1997 ; 94 (23) : 12401-12406.
PMID 9356461
 
A splicing variant of the Bcl-2 member Bok with a truncated BH3 domain induces apoptosis but does not dimerize with antiapoptotic Bcl-2 proteins in vitro.
Hsu SY, Hsueh AJ
The Journal of biological chemistry. 1998 ; 273 (46) : 30139-30146.
PMID 9804769
 
Mtd, a novel Bcl-2 family member activates apoptosis in the absence of heterodimerization with Bcl-2 and Bcl-XL.
Inohara N, Ekhterae D, Garcia I, Carrio R, Merino J, Merry A, Chen S, Nˆ†ˆ±ez G
The Journal of biological chemistry. 1998 ; 273 (15) : 8705-8710.
PMID 9535847
 
Evolutionarily conserved Bok proteins in the Bcl-2 family.
Zhang H, Holzgreve W, De Geyter C
FEBS letters. 2000 ; 480 (2-3) : 311-313.
PMID 11034351
 
The expression of Bok is regulated by serum in HC11 mammary epithelial cells.
Ha SH, Lee SR, Lee TH, Kim YM, Baik MG, Choi YJ
Molecules and cells. 2001 ; 12 (3) : 368-371.
PMID 11804337
 
Bcl-2-related protein family gene expression during oligodendroglial differentiation.
Itoh T, Itoh A, Pleasure D
Journal of neurochemistry. 2003 ; 85 (6) : 1500-1512.
PMID 12787069
 
Bcl-2-related protein family gene expression during oligodendroglial differentiation.
Itoh T, Itoh A, Pleasure D
Journal of neurochemistry. 2003 ; 85 (6) : 1500-1512.
PMID 12787069
 
Role of Mtd/Bok in normal and neoplastic B-cell development in the bursa of Fabricius.
Brown CY, Bowers SJ, Loring G, Heberden C, Lee RM, Neiman PE
Developmental and comparative immunology. 2004 ; 28 (6) : 619-634.
PMID 15177115
 
BOK and NOXA are essential mediators of p53-dependent apoptosis.
Yakovlev AG, Di Giovanni S, Wang G, Liu W, Stoica B, Faden AI
The Journal of biological chemistry. 2004 ; 279 (27) : 28367-28374.
PMID 15102863
 
Membrane translocation and oligomerization of hBok are triggered in response to apoptotic stimuli and Bnip3.
Gao S, Fu W, Dˆºrrenberger M, De Geyter C, Zhang H
Cellular and molecular life sciences : CMLS. 2005 ; 62 (9) : 1015-1024.
PMID 15868100
 
Nuclear translocation of the pro-apoptotic Bcl-2 family member Bok induces apoptosis.
Bartholomeusz G, Wu Y, Ali Seyed M, Xia W, Kwong KY, Hortobagyi G, Hung MC
Molecular carcinogenesis. 2006 ; 45 (2) : 73-83.
PMID 16302269
 
Loss of proapoptotic Bcl-2-related multidomain proteins in primary melanomas is associated with poor prognosis.
Fecker LF, Geilen CC, Tchernev G, Trefzer U, Assaf C, Kurbanov BM, Schwarz C, Daniel PT, Eberle J
The Journal of investigative dermatology. 2006 ; 126 (6) : 1366-1371.
PMID 16528364
 
Bok, Bcl-2-related Ovarian Killer, Is Cell Cycle-regulated and Sensitizes to Stress-induced Apoptosis.
Rodriguez JM, Glozak MA, Ma Y, Cress WD
The Journal of biological chemistry. 2006 ; 281 (32) : 22729-22735.
PMID 16772296
 
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Contributor(s)

Written11-2006Alexander G Yakovlev

Citation

This paper should be referenced as such :
Yakovlev AG . BOK (BCL2-related ovarian killer). Atlas Genet Cytogenet Oncol Haematol. November 2006 .
URL : http://AtlasGeneticsOncology.org/Genes/BOKID824ch2q37.html

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indexed on : Sat Feb 27 10:49:24 CET 2010

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