TRD (T cell Receptor Delta)

2000-07-01   Marie-Paule Lefranc  

IMGT, LIGM, IGH, UPR CNRS 1142, 141 rue de la Cardonille, 34396 Montpellier Cedex 5, France

Identity

HGNC
TRD
LOCATION
14q11.2
IMAGE
Atlas Image
LEGEND
for complete Figure, see: chromosome 14, IMGT (The International ImMunoGeneTics information system ®) © Copyright 1995-2017 IMGT, IMGT is a CNRS trademark
LOCUSID
6964
ALIAS
TCRD,TCRDV1,TRD@

DNA/RNA

Atlas Image
TRA/TRD
V-GENE: Green box: Functional; Red: Pseudogene.
D-GENE: Blue: Functional.
J-GENE: Yellow: Functional; Pale yellow: Open reading frame; Red: Pseudogene.
C-GENE: Blue: Functional.
for complete Figure, see: locus TRD IMGT (The International ImMunoGeneTics information system ®) © Copyright 1995-2017 IMGT, IMGT is a CNRS trademark

Description

  • The human TRD locus at 14q11.2 comprises a cluster of one TRDV gene (TRDV2), three TRDD segments, and four TRDJ segments, upstream of the unique TRDC gene; another TRDV gene (TRDV3) is localized downstream of the TRDC gene, in inverted orientation of transcription.
  • This cluster spans 60 kb and is localized inside the TRA locus, between the TRAV genes and the TRAJ segments. One TRDV gene (TRDV1) is localized at 360 kb upstream of the TRDC gene, among the TRAV genes. Five variable genes have been found rearranged to both (D)J segments of the TRD locus and TRAJ segments, and can therefore be used for the synthesis of both delta and alpha chains. These genes are described as TRAV/DV.
  • The TRDV genes are unique members of different subgroups. All the TRD genes are functional, with the exception of one TRAV/DV, which has been found either functional or as a pseudogene.
  • Enhancer sequences have been described between the TRDJ3 and the TRDC gene.
  • List of the human TRD genes

    • Mutations

    Note

    Mutations which correspond to allelic polymorphisms of the functional germline TRDV, TRDD, TRDJ and TRDC genes are described in the IMGT database: (IMGT Repertoire>Alignments of alleles)

    Implicated in

    Entity name
    Translocations which frequently result from errors of the recombinase enzyme complexe (RAG1, RAG2, etc.), responsable of the Immunoglobulin and T cell receptor V-J and V-D-J rearrangements. TRDV, TRDD or TRDJ recombination signals or isolated heptamer are frequently observed at the breakpoints.
    Entity name
    t(1;14)(p32;q11); involve TRD -TAL1 in 1p32
    Prognosis
    median survival > 5 yrs in children
    Entity name
    t(8;14)(q24;q11); involve TRD - MYC in 8q24
    Disease
    T-cell acute lymphocytic leukemia (ALL); rare
    Entity name
    t(10;14)(q24;q11); involve TRD - HOX11 in 10q24
    Disease
    T- cell acute lymphoblastic leukemia (ALL) and non-Hodgkin lymphoma (NHL)
    Prognosis
    not unfavourable
    Entity name
    t(11;14)(p13;q11); involve TRD - RBTN2 in 11p13
    Disease
    T-cell acute lymphocytic leukemia (ALL)
    Entity name
    t(11;14)(p15;q11); involve TRD - RBTN1 in 11p15
    Disease
    T-cell Acute lymphocytic leukemia (ALL)
    Entity name
    t(14;14)(q11;q32), inv(14)(q11q32); involve TRD - TCL1 in 14q32
    Disease
    T-cell prolymphocytic leukemia (T-PLL) and adult T cell leukemia/lymphoma
    Prognosis
    poor

    Breakpoints

    Atlas Image

    Other Information

    Locus ID:

    NCBI: 6964
    HGNC: 12252

    Variants:

    dbSNP: 6964
    ClinVar: 6964
    COSMIC: TRD

    References

    Pubmed IDYearTitleCitations
    343650172021Memory and naïve gamma delta regulatory T-cell gene expression in the first 24-weeks of peanut oral immunotherapy.5
    343650172021Memory and naïve gamma delta regulatory T-cell gene expression in the first 24-weeks of peanut oral immunotherapy.5
    307645442019Early Pregnancy Human Decidua is Enriched with Activated, Fully Differentiated and Pro-Inflammatory Gamma/Delta T Cells with Diverse TCR Repertoires.22
    307645442019Early Pregnancy Human Decidua is Enriched with Activated, Fully Differentiated and Pro-Inflammatory Gamma/Delta T Cells with Diverse TCR Repertoires.22
    282858142017Thymic Determinants of γδ T Cell Differentiation.65
    283683472017The Role of Th-17 Cells and γδ T-Cells in Modulating the Systemic Inflammatory Response to Severe Burn Injury.16
    282858142017Thymic Determinants of γδ T Cell Differentiation.65
    283683472017The Role of Th-17 Cells and γδ T-Cells in Modulating the Systemic Inflammatory Response to Severe Burn Injury.16
    272107462016RhoB Mediates Phosphoantigen Recognition by Vγ9Vδ2 T Cell Receptor.59
    273739692016Highly specific and potently activating Vγ9Vδ2-T cell specific nanobodies for diagnostic and therapeutic applications.15
    274129302016[Homology modeling and eukaryotic expression of a modified αβ TCR harboring the immunoglobulin-like domain of γδ TCR].0
    272107462016RhoB Mediates Phosphoantigen Recognition by Vγ9Vδ2 T Cell Receptor.59
    273739692016Highly specific and potently activating Vγ9Vδ2-T cell specific nanobodies for diagnostic and therapeutic applications.15
    274129302016[Homology modeling and eukaryotic expression of a modified αβ TCR harboring the immunoglobulin-like domain of γδ TCR].0
    258649152015The promise of γδ T cells and the γδ T cell receptor for cancer immunotherapy.70

    Citation

    Marie-Paule Lefranc

    TRD (T cell Receptor Delta)

    Atlas Genet Cytogenet Oncol Haematol. 2000-07-01

    Online version: http://atlasgeneticsoncology.org/gene/279/favicon/cancer-prone-explorer/humanGenome