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SOCS2 (suppressor of cytokine signaling 2)

Identity

Other namesCIS-2, Cytokine-inducible SH2 protein 2
CIS2, STAT induced STAT inhibitor-2
Cish2, STAT-induced STAT inhibitor 2
SOCS-2, suppressor of cytokine signaling 2
SSI-2, suppressor of cytokine signaling-2
SSI2
STATI2
HGNC SOCS2
Location 12q21.33
Location_base_pair Starts at 92487729 and ends at 92494109 bp from pter ( according to hg18-Mar_2006).
Local_order By cytogenetic and radiation hybrid mapping, SOCS-2 has been mapped to chromosome 12q21.3-q23 (Yandava et al., 1999).

DNA/RNA

Description 6,38 kb ; 3 Exons. Mouse SOCS2 gene is composed of 3 exons and 2 introns (Metcalf et al., 2000). Human SOCS-2 is a functioning gene that comprises 3 exons spanning roughly 6,38 kb of genomic DNA.
Transcription 2210 bp mRNA. 1 protein (22.2 kDa; 198 aa). Although constitutively expressed SOCS2 mRNA has been detected in several tissues and cell types, its expression is, in general, induced by stimulation with different cytokines and hormones (Rico-Bautista et al., 2006). SOCS2 promoter analysis indicates the presence of AhR and STAT5 binding sites that confer responsiveness to dioxin (Boverhof et al., 2004) and GH (Vidal et al., 2006), respectively.

Protein

 
  Diagram representing the structure of SOCS proteins. At least eight proteins belonging to the SOCS family of proteins are shown (upper panel). They are characterized by the presence of an SH2 central domain and the SOCS box domain at the C-terminus. A small domain called kinase inhibitory region (KIR), only found in SOCS1 and SOCS3, is shown as a small box at the N-terminal region. SOCS proteins can interact with phosphotyrosine phosphorylated proteins through their SH2 domain and with Elongin BC through their SOCS box domain. Other proteins containing a SOCS box domain but lacking a SH2 domain are also shown (lower panel). Adapted from Elliot and Johnston (Elliott and Johnston, 2004) with modifications.
Description 22.2 kDa; 198 aa.
Expression SOCS mRNA and protein levels are constitutively low in unstimulated cells, but their expression is rapidly induced upon cytokine stimulation, thereby creating a negative feedback loop. Its expression is, in general, induced by stimulation with different cytokines and hormones (Rico-Bautista et al., 2006).
Localisation Intracellular, cytoplasm.
Function SOCS mechanisms of action rely on their ability to bind tyrosine phosphorylated proteins through their SH2 domains, but also to bind Elongin BC through their SOCS box domains. SOCS family proteins form part of a classical negative feedback system that regulates cytokine signal transduction (Rico-Bautista et al., 2006). SOCS2 appears to be a negative regulator in the growth hormone/IGF1 signaling pathway (Metcalf et al., 2000). SOCS2 appear to be involved in regulating protein turnover, targeting proteins for proteasome-mediated degradation (Rico-Bautista et al., 2004).

Mutations

Note SNP: increasing the risk of type 2 diabetes.

Implicated in

Entity Diabete
Note Susceptibility: to type 2 diabetes (Kato et al., 2006).
  
Entity Metabolism
Note SOCS2 null mice are giants but not obese (Metcalf et al., 2000). SOCS2 deficient mice have some metabolic characteristics that can be related to the enhanced GH actions (Rico-Bautista et al., 2005).
  
Entity Bone
Note Analysis of SOCS2 null mice have revealed that the absence of SOCS2 induces a reduction in the trabecular and cortical volumetric bone mineral density (Lorentzon et al., 2005). SOCS2 induces the differentiation of C2C12 mesenchymal cells into myoblasts or osteoblasts (Ouyang et al., 2006).
  
Entity Neural development
Note SOCS2 plays a critical role in neuronal development, growth, and stem cell differentiation (Turnley et al., 2002).
  
Entity Cancer
Note SOCS2 has been associated with cancer such as myeloid leukaemia, pulmonary adenocarcinoma, and ovarian cancer, breast cancer, and anal cancer.
  

External links

Nomenclature
HGNCSOCS2   19382
Entrez_GeneSOCS2  8835  suppressor of cytokine signaling 2
Cards
AtlasSOCS2ID44123ch12q21
GeneCardsSOCS2
EnsemblENSG00000120833 [Gene_View]  SOCS2 [Vega]
GenatlasSOCS2
Genomic and cartography
GoldenPathSOCS2  -  12q21.33   chr12:92487729-92494109 +  12q   [Description]    (hg18-Mar_2006)
EnsemblSOCS2 - 12q [CytoView]
NCBIMapview
OMIM605117 Disease map [OMIM]
HomoloGeneSOCS2
Gene and transcription
GenbankAB004903 [ ENTREZ ]
GenbankAB006966 [ ENTREZ ]
GenbankAF020590 [ ENTREZ ]
GenbankAF037989 [ ENTREZ ]
GenbankAK290546 [ ENTREZ ]
RefSeqNM_003877 [ SRS ]    NM_003877 [ ENTREZ ]
RefSeqAC_000055 [ SRS ]    AC_000055 [ ENTREZ ]
RefSeqAC_000144 [ SRS ]    AC_000144 [ ENTREZ ]
RefSeqNC_000012 [ SRS ]    NC_000012 [ ENTREZ ]
RefSeqNT_019546 [ SRS ]    NT_019546 [ ENTREZ ]
RefSeqNW_001838061 [ SRS ]    NW_001838061 [ ENTREZ ]
RefSeqNW_925395 [ SRS ]    NW_925395 [ ENTREZ ]
CCDSSOCS2 CCDS - NCBI
AceViewSOCS2 AceView - NCBI
UnigeneHs.485572 [ SRS ]    Hs.485572 [ NCBI ]
Fast-db11538 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtO14508 [ SRS]    O14508 [ EXPASY ]     O14508 [ INTERPRO ]     O14508 [ UNIPROT ] O14508 [ VarSplice FASTA ]
PrositePS50001 SH2 [ SRS ]    PS50001 SH2 [ Expasy ]
PrositePS50225 SOCS [ SRS ]    PS50225 SOCS [ Expasy ]
InterproIPR000980 SH2 [ SRS ]    IPR000980 SH2 [ EBI ]
InterproIPR001496 SOCS_C [ SRS ]    IPR001496 SOCS_C [ EBI ]
CluSTrO14508
PfamPF00017 SH2 [ SRS ]    PF00017 SH2 [ Sanger ]    pfam00017 [ NCBI-CDD ]
PfamPF07525 SOCS_box [ SRS ]    PF07525 SOCS_box [ Sanger ]    pfam07525 [ NCBI-CDD ]
SmartSM00252 SH2 [EMBL]
SmartSM00253 SOCS [EMBL]
ProdomPD000093 SH2[INRA-Toulouse]
ProdomO14508 SOCS2_HUMAN [ Domain structure ]   O14508 SOCS2_HUMAN  [ sequences sharing at least 1 domain ]
BlocksO14508
PDB2C9W [ SRS ]    2C9W [ PdbSum ],   2C9W [ IMB ]   2C9W [ RSDB ]
HPRD05490
Protein Interaction databases
DIPO14508
IntActO14508
Polymorphism : SNP, mutations, diseases
OMIM605117    [ map ]   
GENETests605117
SNPSOCS2 [dbSNP-NCBI]  
SNPNM_003877 [SNP-NCI]  
SNPSOCS2 [GeneSNPs - Utah]  SOCS2] [HGBASE - SRS]
HAPMAPSOCS2 [HAPMAP]  
COSMICSOCS2 [Somatic mutation (COSMIC-CGP-Sanger)]  
HGMDSOCS2
Genetic AssociationSOCS2
CDC HuGESOCS2
General knowledge
Family BrowserSOCS2 [UCSC Family Browser]
SOURCENM_003877
SMDHs.485572
SAGEHs.485572
GOregulation of cell growth [Amigo]  regulation of cell growth
GOSH3/SH2 adaptor activity [Amigo]  SH3/SH2 adaptor activity
GOgrowth hormone receptor binding [Amigo]  growth hormone receptor binding
GOprolactin receptor binding [Amigo]  prolactin receptor binding
GOinsulin-like growth factor receptor binding [Amigo]  insulin-like growth factor receptor binding
GOprotein binding [Amigo]  protein binding
GOcytoplasm [Amigo]  cytoplasm
GOanti-apoptosis [Amigo]  anti-apoptosis
GOintracellular signaling cascade [Amigo]  intracellular signaling cascade
GOJAK-STAT cascade [Amigo]  JAK-STAT cascade
GOJAK pathway signal transduction adaptor activity [Amigo]  JAK pathway signal transduction adaptor activity
GOnegative regulation of signal transduction [Amigo]  negative regulation of signal transduction
KEGGJak-STAT signaling pathway
KEGGInsulin signaling pathway
KEGGType II diabetes mellitus
PubGeneSOCS2
TreeFamSOCS2
CTD8835 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeSOCS2 Related clones (RZPD - Berlin)
PubMed
PubMed31 Pubmed reference(s) in Entrez

Bibliography

Radiation hybrid and cytogenetic mapping of SOCS1 and SOCS2 to chromosomes 16p13 and 12q, respectively.
Yandava CN, Pillari A, Drazen JM
Genomics. 1999 ; 61 (1) : 108-111.
PMID 10512686
 
Gigantism in mice lacking suppressor of cytokine signalling-2.
Metcalf D, Greenhalgh CJ, Viney E, Willson TA, Starr R, Nicola NA, Hilton DJ, Alexander WS
Nature. 2000 ; 405 (6790) : 1069-1073.
PMID 10890450
 
Suppressor of cytokine signaling 2 regulates neuronal differentiation by inhibiting growth hormone signaling.
Turnley AM, Faux CH, Rietze RL, Coonan JR, Bartlett PF
Nature neuroscience. 2002 ; 5 (11) : 1155-1162.
PMID 12368809
 
2,3,7,8-Tetrachlorodibenzo-p-dioxin induces suppressor of cytokine signaling 2 in murine B cells.
Boverhof DR, Tam E, Harney AS, Crawford RB, Kaminski NE, Zacharewski TR
Molecular pharmacology. 2004 ; 66 (6) : 1662-1670.
PMID 15371557
 
SOCS: role in inflammation, allergy and homeostasis.
Elliott J, Johnston JA
Trends in immunology. 2004 ; 25 (8) : 434-440.
PMID 15275643
 
Downregulation of the growth hormone-induced Janus kinase 2/signal transducer and activator of transcription 5 signaling pathway requires an intact actin cytoskeleton.
Rico-Bautista E, Negrˆ‚n-Martˆ‚nez C, Novoa-Mogollˆ„n J, Fernˆ°ndez-Perez L, Flores-Morales A
Experimental cell research. 2004 ; 294 (1) : 269-280.
PMID 14980520
 
Reduced bone mineral density in SOCS-2-deficient mice.
Lorentzon M, Greenhalgh CJ, Mohan S, Alexander WS, Ohlsson C
Pediatric research. 2005 ; 57 (2) : 223-226.
PMID 15585682
 
Suppressor of cytokine signaling-2 deficiency induces molecular and metabolic changes that partially overlap with growth hormone-dependent effects.
Rico-Bautista E, Greenhalgh CJ, Tollet-Egnell P, Hilton DJ, Alexander WS, Norstedt G, Flores-Morales A
Molecular endocrinology (Baltimore, Md.). 2005 ; 19 (3) : 781-793.
PMID 15563548
 
Association of single-nucleotide polymorphisms in the suppressor of cytokine signaling 2 (SOCS2) gene with type 2 diabetes in the Japanese.
Kato H, Nomura K, Osabe D, Shinohara S, Mizumori O, Katashima R, Iwasaki S, Nishimura K, Yoshino M, Kobori M, Ichiishi E, Nakamura N, Yoshikawa T, Tanahashi T, Keshavarz P, Kunika K, Moritani M, Kudo E, Tsugawa K, Takata Y, Hamada D, Yasui N, Miyamoto T, Shiota H, Inoue H, Itakura M
Genomics. 2006 ; 87 (4) : 446-458.
PMID 16406727
 
SOCS-2 interferes with myotube formation and potentiates osteoblast differentiation through upregulation of JunB in C2C12 cells.
Ouyang X, Fujimoto M, Nakagawa R, Serada S, Tanaka T, Nomura S, Kawase I, Kishimoto T, Naka T
Journal of cellular physiology. 2006 ; 207 (2) : 428-436.
PMID 16419040
 
Suppressor of cytokine signaling (SOCS) 2, a protein with multiple functions.
Rico-Bautista E, Flores-Morales A, Fernˆ°ndez-Pˆ©rez L
Cytokine & growth factor reviews. 2006 ; 17 (6) : 431-439.
PMID 17070092
 
In vivo transcript profiling and phylogenetic analysis identifies suppressor of cytokine signaling 2 as a direct signal transducer and activator of transcription 5b target in liver.
Vidal OM, Merino R, Rico-Bautista E, Fernandez-Perez L, Chia DJ, Woelfle J, Ono M, Lenhard B, Norstedt G, Rotwein P, Flores-Morales A
Molecular endocrinology (Baltimore, Md.). 2007 ; 21 (1) : 293-311.
PMID 17008382
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written10-2007Leandro Fernández-Pérez, Amilcar Flores-Morales
University of Las Palmas de GC, Faculty of Health Sciences, Molecular and Translational Endocrinology Group, c/ Dr. Pasteur s/n - Campus San Cristobal, 35016 - Las Palmas, Spain, (LFP); Department of Molecular Medicine and Surgery, Karolinska Institute, 17176 Stockholm, Sweden (AFM)

Citation

This paper should be referenced as such :
Fernández-Pérez L, Flores-Morales A . SOCS2 (suppressor of cytokine signaling 2). Atlas Genet Cytogenet Oncol Haematol. October 2007 .
URL : http://AtlasGeneticsOncology.org/Genes/SOCS2ID44123ch12q21.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 27 13:29:39 2008


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