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BAD (BCL2-antagonist of cell death)

Identity

Other namesBAD (BCLXL/BCL2 associated death promoter homolog
BBC2
BCL2L8 (Bcl-2-like 8 protein)
HGNC (Hugo) BAD
LocusID (NCBI) 572
Location 11q13.1
Location_base_pair Starts at 64037300 and ends at 64052176 bp from pter ( according to hg19-Feb_2009)  [Mapping]

DNA/RNA

Description The gene spans 14,9 kb, on reverse strand
Transcription alternate splicing encoding for the same protein

Protein

Description 168 amino acids, 18,4 kDa.; 'BH3 only' Bcl2 family member (do not possess BH1, 2 and 4 domains). The BH3 domain is essential for proapoptotic function. There is structural similarities between the Bcl2 family proteins and bacterial toxins which form membrane pores after oligomerisation. Do not possess a transmembrane domain in COOH term, in contrast with a number of other BCL2 family members; may be phosphorylated on serine residues (see below).
Expression wide
Localisation cytoplasm vs membrane of the mitochondria (see below)
Function Proapoptotic protein:
  • In its inactive form, Bad is phosphorylated. Proteins which phosphorylate BAD are: RAF1, ribosomal S6 kinase 1 (p90/RSK1), AKT/PKB (PI3K-AKT pathway) at Serine 136 (in murine BAD), PKA at Ser 155, PIM1and PIM2 at Ser 112 (Ser 75, 99, and 118 in human BAD correspond to Ser 112, 136, and 155 in murine BAD respectively). Phosphorylated BAD interacts with 14-3-3 scaffold proteins in the cytoplasm (14-3-3 is a protein which can interact with a hundred other proteins).
  • Cleavage of the 14-3-3 protein by caspase-3 allows the release of BAD from its association with the 14-3-3 protein and facilitates BAD translocation from the cytosol to the mitochondria. Under apoptotic stimuli also, calcineurin (Ca++ activated protein phosphatase) dephosphorylates BAD, also allowing its dissociation from 14-3-3.
  • Once BAD is dephosphorylated (posttranslational modification), it is active; it translocates to the outer membrane of the mitochondria (like other proapototic members of the Bcl2 family), and forms heterodimers with BCL-XL (and, to a lesser extend, heterodimers with BCL2 or BCL2L2) to block BCL-XL antiapoptotic function. Dimers BCL-XL /BAD are similar to dimers BCL-XL /BAK
  • Homology Bcl2 family members:
  • The antiapoptotic members with BH 1 to 4 domains: BCL2 (18q21), BCL1L1/BCLX-L ID: n129> (20q11), BCL2L2/BCL-W (14q11), BCL1L10/BCL-B/BOO/DIVA (15q21), BCL2A1/BFL1/A1 (15q24), BNIP1/EIB-19K (5q33), MCL1 (1q21) HOMOLOGY
  • The proapoptotic members with BH 1 to 3 domains: BAK1/BCL2L7 (6p21), BAX (19q13), (22q11), (2q37)
  • The only-BH3 apoptotic members: BBC3/PUMA (19q13), BCL2L11/BIM/BOD (2q13), BID (22q11), BIK/NBK/BBC1 (22q13), BLK (8p23), BMF (15q14), BNIP3/NIP3 (10q26), BMIP3L/NIX (8p21), HRK/DP5/BID3 (12q24), PMAIP1/NOXA (18q21)
  • External links

    Nomenclature
    HGNC (Hugo)BAD   936
    Entrez_Gene (NCBI)BAD  572  BCL2-associated agonist of cell death
    Cards
    AtlasBADID130ch11q13
    GeneCards (Weizmann)BAD
    Ensembl (Hinxton)ENSG00000002330 [Gene_View]  chr11:64037300-64052176 [Contig_View]  BAD [Vega]
    AceView (NCBI)BAD
    Genatlas (Paris)BAD
    euGene (Indiana)572
    SOURCE (Stanford)NM_004322 NM_032989
    Genomic and cartography
    GoldenPath (UCSC)BAD  -  11q13.1   chr11:64037300-64052176 -  11q13.1   [Description]    (hg19-Feb_2009)
    EnsemblBAD - 11q13.1 [CytoView]
    Mapping of homologs : NCBIBAD [Mapview]
    OMIM603167   
    Gene and transcription
    Genbank (Entrez)AB451254 AB451378 AF021792 AF031523 AK023420
    RefSeq transcript (SRS)NM_004322 NM_032989
    RefSeq transcript (Entrez)NM_004322 NM_032989
    RefSeq genomic (SRS)AC_000143 NC_000011 NT_167190 NW_001838024
    RefSeq genomic (Entrez)AC_000143 NC_000011 NT_167190 NW_001838024
    Consensus coding sequences : CCDS (NCBI)BAD
    Cluster EST : UnigeneHs.370254 [ SRS ] Hs.370254 [ NCBI ]
    Alternative Splicing : Fast-db (Paris)8846
    Alternative Splicing GalleryENSG00000002330
    Gene ExpressionBAD [ NCBI-GEO ]   BAD [ EBI - ARRAY_EXPRESS ]
    Protein : pattern, domain, 3D structure
    UniProt/SwissProtQ92934 (SRS) Q92934 (Uniprot)
    With graphics : InterProQ92934
    Splice isoforms : SwissVarQ92934(Swissvar)
    Domaine pattern : Prosite (SRS)BH3 (PS01259)   
    Domaine pattern : Prosite (Expaxy)BH3 (PS01259)   
    Domains : Interpro (SRS)Bcl-2_BAD   
    Domains : Interpro (EBI)Bcl-2_BAD   
    Related proteins : CluSTrQ92934
    Domain families : Pfam (SRS)Bcl-2_BAD (PF10514)   
    Domain families : Pfam (Sanger)Bcl-2_BAD (PF10514)   
    Domain families : Pfam (NCBI)pfam10514   
    Blocks (Seattle)Q92934
    PDB (SRS)1G5J   
    PDB (PDBSum)1G5J   
    PDB (IMB)1G5J   
    PDB (RSDB)1G5J   
    Human Protein AtlasENSG00000002330
    HPRD04409
    IPIIPI00024291   IPI01012371   IPI00793228   IPI01011886   IPI01009237   
    Protein Interaction databases
    DIP (DOE-UCLA)Q92934
    IntAct (EBI)Q92934
    FunCoupENSG00000002330
    REACTOMEBAD
    BioGRIDBAD
    InParanoidQ92934
    Interologous Interaction database Q92934
    Polymorphism : SNP, mutations, diseases
    SNP Single Nucleotide Polymorphism (NCBI)BAD
    SNP (GeneSNP Utah)BAD
    SNP : HGBaseBAD
    Genetic variants : HAPMAPBAD
    Somatic Mutations in Cancer : COSMICBAD 
    CONAN: Copy Number AnalysisBAD 
    Mutations and Diseases : HGMDBAD
    OMIM603167   
    GENETests603167   
    Disease Genetic AssociationBAD
    Huge Navigator BAD [HugePedia]  BAD [HugeCancerGEM]
    Genomic VariantsBAD
    snp3D : Map Gene to Disease572
    General knowledge
    Homologs : HomoloGeneBAD
    Homology/Alignments : Family Browser (UCSC)BAD
    Phylogenetic Trees/Animal Genes : TreeFamBAD
    Chemical/Protein Interactions : CTD572
    Chemical/Pharm GKB GenePA25236
    Clinical trialBAD
    Cancer Resource (Charite)ENSG00000002330
    Ontology : AmiGOprotein binding  phospholipid binding  cytoplasm  mitochondrion  mitochondrial outer membrane  mitochondrial outer membrane  cytosol  cytosol  glucose catabolic process  apoptotic process  induction of apoptosis  activation of cysteine-type endopeptidase activity involved in apoptotic process  activation of cysteine-type endopeptidase activity involved in apoptotic process  epidermal growth factor receptor signaling pathway  lipid binding  fibroblast growth factor receptor signaling pathway  induction of apoptosis by extracellular signals  induction of apoptosis by intracellular signals  induction of apoptosis by intracellular signals  activation of pro-apoptotic gene products  activation of pro-apoptotic gene products  cysteine-type endopeptidase activator activity involved in apoptotic process  positive regulation of mitochondrial membrane potential  membrane  cytokine-mediated signaling pathway  protein kinase binding  protein phosphatase binding  positive regulation of insulin secretion  positive regulation of glucokinase activity  positive regulation of insulin secretion involved in cellular response to glucose stimulus  glucose homeostasis  positive regulation of apoptotic process  positive regulation of apoptotic process  positive regulation of cysteine-type endopeptidase activity involved in apoptotic process  type B pancreatic cell proliferation  positive regulation of B cell differentiation  positive regulation of T cell differentiation  ADP metabolic process  ATP metabolic process  regulation of mitochondrial membrane permeability  pore complex assembly  protein heterodimerization activity  nerve growth factor receptor signaling pathway  phosphatidylinositol-mediated signaling  positive regulation of epithelial cell proliferation  cellular process regulating host cell cycle in response to virus  cellular response to mechanical stimulus  cellular response to nicotine  cellular response to lipid  cellular response to hypoxia  positive regulation of release of cytochrome c from mitochondria  positive regulation of type B pancreatic cell development  
    Ontology : EGO-EBIprotein binding  phospholipid binding  cytoplasm  mitochondrion  mitochondrial outer membrane  mitochondrial outer membrane  cytosol  cytosol  glucose catabolic process  apoptotic process  induction of apoptosis  activation of cysteine-type endopeptidase activity involved in apoptotic process  activation of cysteine-type endopeptidase activity involved in apoptotic process  epidermal growth factor receptor signaling pathway  lipid binding  fibroblast growth factor receptor signaling pathway  induction of apoptosis by extracellular signals  induction of apoptosis by intracellular signals  induction of apoptosis by intracellular signals  activation of pro-apoptotic gene products  activation of pro-apoptotic gene products  cysteine-type endopeptidase activator activity involved in apoptotic process  positive regulation of mitochondrial membrane potential  membrane  cytokine-mediated signaling pathway  protein kinase binding  protein phosphatase binding  positive regulation of insulin secretion  positive regulation of glucokinase activity  positive regulation of insulin secretion involved in cellular response to glucose stimulus  glucose homeostasis  positive regulation of apoptotic process  positive regulation of apoptotic process  positive regulation of cysteine-type endopeptidase activity involved in apoptotic process  type B pancreatic cell proliferation  positive regulation of B cell differentiation  positive regulation of T cell differentiation  ADP metabolic process  ATP metabolic process  regulation of mitochondrial membrane permeability  pore complex assembly  protein heterodimerization activity  nerve growth factor receptor signaling pathway  phosphatidylinositol-mediated signaling  positive regulation of epithelial cell proliferation  cellular process regulating host cell cycle in response to virus  cellular response to mechanical stimulus  cellular response to nicotine  cellular response to lipid  cellular response to hypoxia  positive regulation of release of cytochrome c from mitochondria  positive regulation of type B pancreatic cell development  
    Pathways : BIOCARTARole of nicotinic acetylcholine receptors in the regulation of apoptosis [Genes]    AKT Signaling Pathway [Genes]    Inhibition of Cellular Proliferation by Gleevec [Genes]    Multiple antiapoptotic pathways from IGF-1R signaling lead to BAD phosphorylation [Genes]    Phosphoinositides and their downstream targets. [Genes]    Ras Signaling Pathway [Genes]    Ceramide Signaling Pathway [Genes]    Apoptotic Signaling in Response to DNA Damage [Genes]    Trefoil Factors Initiate Mucosal Healing [Genes]    IL-2 Receptor Beta Chain in T cell Activation [Genes]    Regulation of BAD phosphorylation [Genes]   
    Pathways : KEGGColorectal cancerAmyotrophic lateral sclerosis (ALS)ApoptosisFocal adhesionVEGF signaling pathwayInsulin signaling pathwayNeurodegenerative Disorders
    Other databases
    Probes
    Probes : ImagenesBAD Related clones (RZPD - Berlin)
    Litterature
    PubMed179 Pubmed reference(s) in Entrez
    PubGeneBAD
    iHOPBAD

    Bibliography

    Bad, a heterodimeric partner for Bcl-XL and Bcl-2, displaces Bax and promotes cell death.
    Yang E, Zha J, Jockel J, Boise LH, Thompson CB, Korsmeyer SJ
    Cell. 1995 ; 80 (2) : 285-291.
    PMID 7834748
     
    Dimerization properties of human BAD. Identification of a BH-3 domain and analysis of its binding to mutant BCL-2 and BCL-XL proteins.
    Ottilie S, Diaz JL, Horne W, Chang J, Wang Y, Wilson G, Chang S, Weeks S, Fritz LC, Oltersdorf T
    The Journal of biological chemistry. 1997 ; 272 (49) : 30866-30872.
    PMID 9388232
     
    Interleukin-3-induced phosphorylation of BAD through the protein kinase Akt.
    del Peso L, Gonzˆ°lez-Garcˆ‚a M, Page C, Herrera R, Nuˆ±ez G
    Science (New York, N.Y.). 1997 ; 278 (5338) : 687-689.
    PMID 9381178
     
    Bad is a BH3 domain-containing protein that forms an inactivating dimer with Bcl-XL.
    Kelekar A, Chang BS, Harlan JE, Fesik SW, Thompson CB
    Molecular and cellular biology. 1997 ; 17 (12) : 7040-7046.
    PMID 9372935
     
    Ca2+-induced apoptosis through calcineurin dephosphorylation of BAD.
    Wang HG, Pathan N, Ethell IM, Krajewski S, Yamaguchi Y, Shibasaki F, McKeon F, Bobo T, Franke TF, Reed JC
    Science (New York, N.Y.). 1999 ; 284 (5412) : 339-343.
    PMID 10195903
     
    14-3-3 proteins and survival kinases cooperate to inactivate BAD by BH3 domain phosphorylation.
    Datta SR, Katsov A, Hu L, Petros A, Fesik SW, Yaffe MB, Greenberg ME
    Molecular cell. 2000 ; 6 (1) : 41-51.
    PMID 10949026
     
    Role of PI3-kinase-dependent Bad phosphorylation and altered transcription in cytokine-mediated neutrophil survival.
    Cowburn AS, Cadwallader KA, Reed BJ, Farahi N, Chilvers ER
    Blood. 2002 ; 100 (7) : 2607-2616.
    PMID 12239175
     
    Induction of Bad-mediated apoptosis by Sindbis virus infection: involvement of pro-survival members of the Bcl-2 family.
    Moriishi K, Koura M, Matsuura Y
    Virology. 2002 ; 292 (2) : 258-271.
    PMID 11878929
     
    Mutation of BAD within the BH3 domain impairs its phosphorylation-mediated regulation.
    Adachi M, Zhang YB, Imai K
    FEBS letters. 2003 ; 551 (1-3) : 147-152.
    PMID 12965220
     
    The PIM-2 kinase phosphorylates BAD on serine 112 and reverses BAD-induced cell death.
    Yan B, Zemskova M, Holder S, Chin V, Kraft A, Koskinen PJ, Lilly M
    The Journal of biological chemistry. 2003 ; 278 (46) : 45358-45367.
    PMID 12954615
     
    Cleavage of 14-3-3 protein by caspase-3 facilitates bad interaction with Bcl-x(L) during apoptosis.
    Won J, Kim DY, La M, Kim D, Meadows GG, Joe CO
    The Journal of biological chemistry. 2003 ; 278 (21) : 19347-19351.
    PMID 12657644
     
    Structural biology of the Bcl-2 family of proteins.
    Petros AM, Olejniczak ET, Fesik SW
    Biochimica et biophysica acta. 2004 ; 1644 (2-3) : 83-94.
    PMID 14996493
     
    Bcl-2 family members: integrators of survival and death signals in physiology and pathology [corrected].
    Schinzel A, Kaufmann T, Borner C
    Biochimica et biophysica acta. 2004 ; 1644 (2-3) : 95-105.
    PMID 14996494
     
    Control of proliferation by Bcl-2 family members.
    Bonnefoy-Berard N, Aouacheria A, Verschelde C, Quemeneur L, Marˆßais A, Marvel J
    Biochimica et biophysica acta. 2004 ; 1644 (2-3) : 159-168.
    PMID 14996500
     
    Bcl-2 family members and disease.
    Sorenson CM
    Biochimica et biophysica acta. 2004 ; 1644 (2-3) : 169-177.
    PMID 14996501
     
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    Contributor(s)

    Written08-2004Jean-Loup Huret, Sylvie Senon

    Citation

    This paper should be referenced as such :
    Huret JL, Senon S . BAD (BCL2-antagonist of cell death). Atlas Genet Cytogenet Oncol Haematol. August 2004 .
    URL : http://AtlasGeneticsOncology.org/Genes/BADID130ch11q13.html

    This paper is referenced by INIST as such :
    http://documents.irevues.inist.fr/bitstream/2042/38119/1/08-2004-BADID130ch11q13.pdf   [ Bibliographic record ]

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    indexed on : Sat Apr 28 14:59:12 CEST 2012

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