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BCAR1 (breast cancer anti-estrogen resistance 1)

Written2011-12Allison Berrier
Department of Oral, Craniofacial Biology, LSUHSC-NO School of Dentistry, 1100 Florida Avenue, Clinical Bldg, Room 8301, New Orleans, LA 70119, USA

(Note : for Links provided by Atlas : click)

Identity

Alias (NCBI)CAS
CAS1
CASS1
CRKAS
FLJ12176
FLJ45059
P130Cas
HGNC (Hugo) BCAR1
HGNC Alias symbP130Cas
Crkas
CAS
CASS1
HGNC Alias nameCrk-associated substrate
 Cas scaffolding protein family member 1
HGNC Previous name"breast cancer anti-estrogen resistance 1
 BCAR1, Cas family scaffolding protein
 BCAR1, Cas family scaffold protein"
LocusID (NCBI) 9564
Atlas_Id 761
Location 16q23.1  [Link to chromosome band 16q23]
Location_base_pair Starts at 75228181 and ends at 75251624 bp from pter ( according to GRCh38/hg38-Dec_2013)  [Mapping BCAR1.png]
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BCAR1 (16q23.1) / BCAR1 (16q23.1)LDHB (12p12.1) / BCAR1 (16q23.1)RBM6 (3p21.31) / BCAR1 (16q23.1)

DNA/RNA

 
  Figure 1.

Protein

Note BCAR1 isoforms
Isoform 1: 916 aa, calc MW= 97,7 kDa. Isoform 2: 888 aa, (alternate 5' sequence compared to variant 1) calc MW= 95,1 kDa. Isoform 3: 888 aa, (alternate 5' sequence compared to variant 1) calc MW= 95,3 kDa. Isoform 4: 888 aa, (alternate 5' sequence and alternate splice site in the substrate domain compared to variant 1 resulting in a different N-terminus and additional segment in the middle region compared to isoform 1) calc MW= 95,3 kDa. Isoform 5: 870 aa, (lacks an exon in the 5' region, alternate AUG start codon, has a different N-terminus compared to isoform 1) calc MW= 93,16 kDa. Isoform 6: 870 aa, (different N-terminus compared to isoform 1) calc MW= 93,2 kDa. Isoform 7, 868 aa (shorter, alternate 5' sequence, different N-terminus compared to isoform 1) calc MW= 93 kDa. Isoform 8, 722 aa, (alternate internal sequence compared to isoform 1, different N-terminus compared to isoform 1) calc MW= 77,6 kDa. Isoform 9: 660 aa, (shorter alternate 5' sequence, different N-terminus compared to isoform 1) calc MW= 70,7 kDa.

BCAR proteins migrate during SDS-PAGE electrophoresis at a significantly higher molecular weight than predicted from sequence analysis perhaps due to the extensive phosphorylation of BCAR proteins. Calculated MW 93,2 kDa, SDS-PAGE observed MW 130 kDa. Potential sites of human BCAR1 phosphorylation (PhosphoSitePlus): tyrosine residues aa 12, 128, 165, 192, 222, 224, 234, 249, 267, 287, 306, 327, 362, 372, 387, 410, 653, 664, 666; serine residues aa 134, 139, 292, 437, 639; and threonine residues aa 269, 326, 385. Inducers of BCAR1 phosphorylation include cell matrix adhesion, extracellular matrix rigidity, growth factors, hormones and progression through the cell cycle. Phosphorylation of BCAR1 regulates BCAR1 dependent activities through altering protein interactions, protein localization and signaling cascades (Tikhmyanova et al., 2010).

 
  Figure 2. Schematic diagram containing BCAR1 protein domains.
Description BCAR1 domains as described in Tikhmyanova et al., 2010 are shown in the schematic diagram in figure 2. The amino terminal 1-65 aa contain the Src homology 3 domain (SH3) domain that binds proline-rich PxxP ligands. The adjacent region 66-447 aa contains the substrate domain (SD) comprised of 15 YxxP motifs that when phosphorylated by tyrosine kinases provides canonical binding sites for proteins containing SH2 domains such as Crk, mechanical forces and stretching of SD may induce conformational changes that allows phosphorylation by kinases and this stretching may promote protein-protein interactions in this domain (Sawada et al., 2006). The serine rich domain within 448-610 aa (serine rich protein interaction domain) contains a four-helix bundle that functions as a scaffold for BCAR1 binding proteins such as Grb2 and 14-3-3 (Nasertorabi et al., 2004; Briknarová et al., 2005). The C-terminal domain of 746-870 aa has a potential FAT (focal adhesion targeting) domain and a helix-loop-helix domain with homology to the transcription factor Id. This region contains the YDYVHL motif that is phosphorylated during cell adhesion.

BCAR1 interacting proteins (BioGRID)
CRKII, p60-Src, PTPN12, PTK2 (FAK), RapGEF1 (C3G), NPHP1, PTPN1 (PTP1B), FES, SHIP2 (INPPL1), ARHGAP32 (p250GAP), Pyk2 (PTK2B), Fyn, CRKL, YWHAZ, SrcIN1 (SNIP), p85-alpha (PI3KR1), c-ABL (bcr/abl), Lyn, Grb2, Dock1, paxillin, TRIP6, SH-PTP2, ID2A, UHRF2, NEDD9, NCK1, VCL, SAP1, Zyxin, BCAR3 (AND-34), CD2AP, LCK, SFN, SH2D3C, JNK/SAPK1, SH3KBP1, tensin 1 (TNS1), HCK, EFS, E2F2, VPS11, HspA5, TUBA1A, GADD34, p140Cap, BCAR1 (p130CAS), PTP-PEST, CIZ, Aurora-A, 14-3-3, CHAT-H, AIP4, APC/C and CDH1.

Expression BCAR1 is ubiquitously expressed and is reportedly detectable in all phases of the cell cycle. In lymphoid development, BCAR is expressed at higher levels in differentiated cells compared to precursors. Barrett's esophagus cancer cell line compared to normal tissue 2,51 increase in BCAR1 expression (Oncomine). Colorectal cancer Ramaswamy multi-cancer there is a 4,2 fold increase in BCAR1 expression compared to other cancers (Oncomine). Gastric cancer cell line Gyorffy cell line 2 there is a 5,0 fold reduction in BCAR 1 expression (Oncomine). In lymphomas, BCAR1 expression is reduced 2,5 fold (Oncomine).
Localisation Cytoplasm, ruffles, cell junctions (Donaldson et al., 2000), nucleus (Kim et al., 2004) and focal adhesions (Nakamoto et al., 1997; Volberg et al., 1995; Winograd-Katz et al., 2009).
Function BCAR1 regulates numerous cellular processes such as invasion, migration, transformation, survival and drug resistance (Di Stefano et al., 2011; Brábek et al., 2004; Brábek et al., 2005) (summarized in figure 3). BCAR1 lacks intrinsic enzymatic activity, yet it is a substrate for several kinases including the Src tyrosine kinase. The original name for BCAR1 was p130CAS abbreviated from Crk-associated substrate because it was first identified as a tyrosine phosphorylated protein in cells transformed by v-src and v-crk oncogenes. BCAR1 regulates cellular behavior by controlling signaling cascades and the dynamic localization of multi-protein complexes. The BCAR1 phosphorylation state is regulated during the cell cycle. During the exit of G2, BCAR1 serine and threonine phosphorylation levels increase and these events disrupt the interactions of BCAR1 with Src and FAK and thus dissociates this complex and contributes to the disassembly of focal adhesions allowing cells to loosen matrix adhesions and thus permitting cell rounding in mitosis. The subsequent reformation of matrix adhesions promotes progression through the cell cycle from mitosis to G1 (Pugacheva et al., 2006).
 
  Figure 3. Extracellular cues that control CAR1 phosphorylation and cellular processes that are regulated by BCAR1.
Homology There is a family containing four proteins related to BCAR1 (breast cancer resistance) that possess names related to the prior nomenclature for BCAR1 homologs in the rat and mouse. The non-human homologs of BCAR1 were named CAS for Crk-associated substrate. This family of proteins includes the protein EFS (embryonal Fyn-associated substrate) (CAS3, CASS3, EFS1, EFS2, HEFS, SIN) identified because of interactions with the Src-family kinases Fyn and Yes and maps to chromosome 14q11.2-q12. A third family member is HEF1 (human enhancer of filamentation 1 known as CASL, CAS-L, NEDD9, CAS2 and CASS2) that maps to chromosome 6p25-p24 and was isolated as a human gene that promotes filamentous growth in yeast. This screen was performed to identify regulators of the cell cycle and polarity. It was also identified as a protein that is tyrosine phosphorylated after clustering integrin β1 in T-lymphocytes. NEDD9 (neural precursor cell expressed, developmentally down-regulated 9) is a gene restricted in expression to early embryonic, but not adult mouse brain. The fourth family member is CASS4 ((HEF-EFS-P130CAS-like)/CAS4) that maps to chromosome 20q13.2-q13.31 and is the newest member of the family that was identified by genomic and transcript homology and demonstrated to function similarly to other BCAR family members. These 4 proteins are conserved from jawed vertebrates through mammals. One BCAR member is found in lower vertebrates and insects. However, no BCAR family member is detectable in C. elegans, S. cerevisiae and other lower eukaryotes.

Mutations

Somatic Catalogue of somatic mutations in cancer: there are currently 10 known somatic mutations in BCAR1. Proceeding from the N-terminus to the C-Terminus of BCAR1, aa 118 proline (identified in the central nervous system), 185 alanine (identified in the central nervous system), 407 threonine (identified in breast tissue), 430 serine (upper aerodigestive tract), 583 serine (identified in prostate tissue), 592 histidine (identified in liver), 708 lysine (identified in the central nervous system), 759 threonine (identified in central nervous system), 780 valine (identified in central nervous system), 795 isoleucine (identified in upper aerodigestive tract). Mutations at aa 118 and 185 are in the substrate domain, 407 and 430 are amino-terminal to the 4 helical bundle, 583 and 592 are in the 4-helix bundle, whereas 759, 780 and 795 localize to the C-terminal domain.

Implicated in

Note
  
Entity Various cancers
Note Overexpression of BCAR1 is linked to poor prognosis and increased cancer metastasis in many cancers. BCAR1 can be upregulated by gene amplification, transcriptional upregulation and changes in protein stability. Hyperphosphorylation of BCAR1 drives cell migration, invasion, cell survival and drug resistance.
  
  
Entity Breast cancer
Prognosis In breast cancers that express high levels of BCAR1, the cancer is more likely to relapse and the tumors frequently have an intrinsic reduced response to tamoxifen (van der Flier et al., 2000; Dorssers et al., 2004).
Oncogenesis Elevated BCAR levels in breast cancers correlates with increased expression of HER2/neu and enhanced cell proliferation (Cabodi et al., 2006; Cabodi et al., 2010). BCAR1 overexpression in breast cancer cells is linked to resistance to the cytotoxic agent Adriamycin (Ta et al., 2008). BCAR1 overexpression is sufficient to induce hyperplasia in the mammary pad during development and pregnancy.
  
  
Entity Prostate cancer
Oncogenesis In prostate cancer, BCAR1 expression is higher compared to control tissue and expression of BCAR1 in prostate cancer correlates with elevated EGFR expression levels (Fromont et al., 2007; Fromont et al., 2011; Cabodi et al., 2010).
  
  
Entity Hepatocellular carcinoma
Prognosis In hepatocellular carcinoma, tumor invasion and poor prognosis correlate with overexpression of BCAR1 and reductions in E-cadherin and β-catenin levels (Guo et al., 2008).
  
  
Entity Nasal polyps
Oncogenesis Nasal polyps can express high levels of BCAR1 (Zhang et al., 2003).
  
  
Entity Colorectal cancer
Oncogenesis Celecoxib cytotoxicity in colorectal cancer is linked to cleavage of BCAR1 and apoptosis. Overexpression of BCAR1 in colorectal cancer cell lines is linked to resistance to celecoxib (Casanova et al., 2006; Weyant et al., 2000).
  
  
Entity Non-small-cell lung cancer (NSCLC)
Oncogenesis BCAR1 is not detected in normal lung tissue, however in non-small-cell lung cancer and tuberculosis and other pulmonary disorders elevated levels of BCAR1 are observed in both the diseased tissue and elevated levels are noted in serum (Deng et al., 2011). In patients with NSCLC the serum levels of BCAR1 proportionally increase with the progression of tumor stage. Interestingly, in patients with elevated serum BCAR1 levels, the serum levels of BCAR1 diminish after removal of the pulmonary lesion or tumor.
  
  
Entity Ovarian cancer
Prognosis In ovarian cancer, an increase in BCAR1 expression correlates with poor 5 year survival rates and reductions in BCAR1 expression result in reduced tumor growth following docetaxel chemotherapy (Nick et al., 2011).
  
  
Entity Oral cancer
Oncogenesis In oral cancers elevated levels of UPAR are indicative of more invasive tumors and enhanced lymph node metastasis. The levels of UPAR in oral cancer correlate with the levels of BCAR1 (Shi et al., 2011).
  
  
Entity Anaplastic large-cell lymphomas
Oncogenesis In anaplastic large-cell lymphomas, the anaplastic lymphoma kinase (ALK) is frequently translocated and a fusion protein with nucleophosmin (NPM)-ALK is generated that contains kinase activity. NPM-ALK transforms fibroblasts, however in BCAR1-/- fibroblasts NPM-ALK fails to induce transformation. Hence, BCAR1 is critical for ALK transformation activity (Ambrogio et al., 2005).
  
  
Entity Chemotherapeutic resistance
Note Overexpression of BCAR1 is linked to drug resistance in multiple tumor types such as breast cancer, lung cancers, glioblastoma and melanoma (Ta et al., 2008). BCAR1 and NEDD9 interact with BCAR3 to mediate anti-estrogen resistance and to control Rap1 GTPase activation (Cai et al., 2003). In a screen of an estrogen dependent cell line, BCAR1 was identified as a gene required for tamoxifen resistance (Brinkman et al., 2000; van der Flier et al., 2000).
  
  
Entity Role of BCAR1 in other pathological conditions or diseases
Note BCAR1 dysfunction is linked to inflammatory disorders, ischemic stroke (Ziemka-Nalecz et al., 2007; Zalewska et al., 2005) and developmental defects. Knockout of BCAR1 is lethal at embryonic stages days 11,5 to 12,5 as a result of cardiovascular dysfunction (Honda et al., 1998). BCAR1 is critical for the pathology of many infectious diseases. The bacterial species Yersinia encodes and secretes a phosphatase YOP that inactivates/dephosphorylates BCAR1 and YOP activity minimizes phagocytosis by macrophages and neutrophils facilitating Yersinia evasion of components of the cellular immune response which disrupts clearance of the bacteria by the host (Deleuil et al., 2003; Hamid et al., 1999). In contrast, in epithelial cells, Yersinia uptake is associated with phosphorylation of BCAR1, thus the bacterium triggers BCAR1 phosphorylation to promote the uptake of the organism in non-phagocytic cells (Weidow et al., 2000). S. typhimurium is an obligate intracellular bacterial pathogen that requires eukaryotic cellular uptake for infection. These bacteria utilize host eukaryotic BCAR1 for efficient bacterial uptake and their infectious cycle (Shi et al., 2006). In addition to bacteria, many viruses also utilize the host protein machinery and BCAR1 for their viral propagation. For instance, internalization of adenovirus is initiated by virus binding to host integrin receptors and virus internalization requires BCAR1 phosphorylation (Li et al., 1998; Li et al., 2000).
  

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PMID 14567719
 
The docking protein p130Cas regulates cell sensitivity to proteasome inhibition.
Zhao M, Vuori K.
BMC Biol. 2011 Oct 28;9:73.
PMID 22034875
 
Transient forebrain ischemia effects FAK-coupled signaling in gerbil hippocampus.
Ziemka-Nalecz M, Zalewska T.
Neurochem Int. 2007 Nov-Dec;51(6-7):405-11. Epub 2007 Apr 22.
PMID 17524523
 
Bcar1/p130Cas protein and primary breast cancer: prognosis and response to tamoxifen treatment.
van der Flier S, Brinkman A, Look MP, Kok EM, Meijer-van Gelder ME, Klijn JG, Dorssers LC, Foekens JA.
J Natl Cancer Inst. 2000 Jan 19;92(2):120-7.
PMID 10639513
 

Citation

This paper should be referenced as such :
Berrier, A
BCAR1 (breast cancer anti-estrogen resistance 1)
Atlas Genet Cytogenet Oncol Haematol. 2012;16(5):329-335.
Free journal version : [ pdf ]   [ DOI ]

Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(3;11)(p25;p15) ANKRD28/NUP98

External links

Nomenclature
HGNC (Hugo)BCAR1   971
Cards
AtlasBCAR1ID761ch16q23
Entrez_Gene (NCBI)BCAR1    "BCAR1 scaffold protein, Cas family member"
AliasesCAS; CAS1; CASS1; CRKAS; 
P130Cas
GeneCards (Weizmann)BCAR1
Ensembl hg19 (Hinxton)ENSG00000050820 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000050820 [Gene_View]  ENSG00000050820 [Sequence]  chr16:75228181-75251624 [Contig_View]  BCAR1 [Vega]
ICGC DataPortalENSG00000050820
TCGA cBioPortalBCAR1
AceView (NCBI)BCAR1
Genatlas (Paris)BCAR1
SOURCE (Princeton)BCAR1
Genetics Home Reference (NIH)BCAR1
Genomic and cartography
GoldenPath hg38 (UCSC)BCAR1  -     chr16:75228181-75251624 -  16q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BCAR1  -     16q23.1   [Description]    (hg19-Feb_2009)
GoldenPathBCAR1 - 16q23.1 [CytoView hg19]  BCAR1 - 16q23.1 [CytoView hg38]
ImmunoBaseENSG00000050820
genome Data Viewer NCBIBCAR1 [Mapview hg19]  
OMIM602941   
Gene and transcription
Genbank (Entrez)AB040024 AF218451 AJ242987 AK026121 AK027608
RefSeq transcript (Entrez)NM_001170714 NM_001170715 NM_001170716 NM_001170717 NM_001170718 NM_001170719 NM_001170720 NM_001170721 NM_014567
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BCAR1
Alternative Splicing GalleryENSG00000050820
Gene ExpressionBCAR1 [ NCBI-GEO ]   BCAR1 [ EBI - ARRAY_EXPRESS ]   BCAR1 [ SEEK ]   BCAR1 [ MEM ]
Gene Expression Viewer (FireBrowse)BCAR1 [ Firebrowse - Broad ]
GenevisibleExpression of BCAR1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9564
GTEX Portal (Tissue expression)BCAR1
Human Protein AtlasENSG00000050820-BCAR1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP56945   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP56945  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP56945
Splice isoforms : SwissVarP56945
PhosPhoSitePlusP56945
Domaine pattern : Prosite (Expaxy)SH3 (PS50002)   
Domains : Interpro (EBI)BCAR1    BCAR1_SH3    CAS_C    CAS_fam    Serine_rich_dom    Serine_rich_sf    SH3-like_dom_sf    SH3_domain   
Domain families : Pfam (Sanger)CAS_C (PF12026)    Serine_rich (PF08824)    SH3_1 (PF00018)   
Domain families : Pfam (NCBI)pfam12026    pfam08824    pfam00018   
Domain families : Smart (EMBL)SH3 (SM00326)  
Conserved Domain (NCBI)BCAR1
Blocks (Seattle)BCAR1
PDB (RSDB)1WYX    3T6G    5O2M    5O2P    5O2Q   
PDB Europe1WYX    3T6G    5O2M    5O2P    5O2Q   
PDB (PDBSum)1WYX    3T6G    5O2M    5O2P    5O2Q   
PDB (IMB)1WYX    3T6G    5O2M    5O2P    5O2Q   
Structural Biology KnowledgeBase1WYX    3T6G    5O2M    5O2P    5O2Q   
SCOP (Structural Classification of Proteins)1WYX    3T6G    5O2M    5O2P    5O2Q   
CATH (Classification of proteins structures)1WYX    3T6G    5O2M    5O2P    5O2Q   
SuperfamilyP56945
Human Protein Atlas [tissue]ENSG00000050820-BCAR1 [tissue]
Peptide AtlasP56945
HPRD04248
IPIIPI00872386   IPI00646673   IPI00954861   IPI00954889   IPI00011998   IPI00641339   IPI00954913   IPI00954799   IPI01018330   IPI00645994   
Protein Interaction databases
DIP (DOE-UCLA)P56945
IntAct (EBI)P56945
BioGRIDBCAR1
STRING (EMBL)BCAR1
ZODIACBCAR1
Ontologies - Pathways
QuickGOP56945
Ontology : AmiGOregulation of cell growth  ruffle  protein binding  cytoplasm  cytoplasm  cytosol  plasma membrane  plasma membrane  focal adhesion  focal adhesion  focal adhesion  actin filament organization  cell adhesion  transmembrane receptor protein tyrosine kinase signaling pathway  epidermal growth factor receptor signaling pathway  G protein-coupled receptor signaling pathway  G protein-coupled receptor signaling pathway  integrin-mediated signaling pathway  insulin receptor signaling pathway  positive regulation of endothelial cell migration  actin cytoskeleton  cell migration  cell migration  SH3 domain binding  protein kinase binding  lamellipodium  positive regulation of cell migration  axon  cellular response to hepatocyte growth factor stimulus  regulation of apoptotic process  platelet-derived growth factor receptor signaling pathway  vascular endothelial growth factor receptor signaling pathway  vascular endothelial growth factor receptor signaling pathway  neurotrophin TRK receptor signaling pathway  hepatocyte growth factor receptor signaling pathway  antigen receptor-mediated signaling pathway  T cell receptor signaling pathway  B cell receptor signaling pathway  cell division  cell chemotaxis  endothelin receptor signaling pathway  actin filament reorganization  
Ontology : EGO-EBIregulation of cell growth  ruffle  protein binding  cytoplasm  cytoplasm  cytosol  plasma membrane  plasma membrane  focal adhesion  focal adhesion  focal adhesion  actin filament organization  cell adhesion  transmembrane receptor protein tyrosine kinase signaling pathway  epidermal growth factor receptor signaling pathway  G protein-coupled receptor signaling pathway  G protein-coupled receptor signaling pathway  integrin-mediated signaling pathway  insulin receptor signaling pathway  positive regulation of endothelial cell migration  actin cytoskeleton  cell migration  cell migration  SH3 domain binding  protein kinase binding  lamellipodium  positive regulation of cell migration  axon  cellular response to hepatocyte growth factor stimulus  regulation of apoptotic process  platelet-derived growth factor receptor signaling pathway  vascular endothelial growth factor receptor signaling pathway  vascular endothelial growth factor receptor signaling pathway  neurotrophin TRK receptor signaling pathway  hepatocyte growth factor receptor signaling pathway  antigen receptor-mediated signaling pathway  T cell receptor signaling pathway  B cell receptor signaling pathway  cell division  cell chemotaxis  endothelin receptor signaling pathway  actin filament reorganization  
Pathways : KEGGRap1 signaling pathway    Chemokine signaling pathway    Focal adhesion    Leukocyte transendothelial migration    Regulation of actin cytoskeleton    Bacterial invasion of epithelial cells   
REACTOMEP56945 [protein]
REACTOME PathwaysR-HSA-8849471 [pathway]   
NDEx NetworkBCAR1
Atlas of Cancer Signalling NetworkBCAR1
Wikipedia pathwaysBCAR1
Orthology - Evolution
OrthoDB9564
GeneTree (enSembl)ENSG00000050820
Phylogenetic Trees/Animal Genes : TreeFamBCAR1
HOGENOMP56945
Homologs : HomoloGeneBCAR1
Homology/Alignments : Family Browser (UCSC)BCAR1
Gene fusions - Rearrangements
Fusion : Fusion_HubARHGAP26--BCAR1    BCAR1--ALDOA    BCAR1--BCAR1    BCAR1--CFDP1    BCAR1--CIC    BCAR1--NRF1    BCAR1--PGA3    BCAR1--PGA4    BCAR1--PGA5    BCAR1--RBM6    BRF1--BCAR1    CFDP1--BCAR1    CMIP--BCAR1    CNTNAP4--BCAR1    GLTSCR1L--BCAR1   
GTF2IRD1--BCAR1    ITPKB--BCAR1    LDHB--BCAR1    LGR4--BCAR1    MCCC1--BCAR1    MT2A--BCAR1    MYLK--BCAR1    RBM6--BCAR1    RP11-680G10.1--BCAR1    SDF4--BCAR1    TAOK2--BCAR1    TC2N--BCAR1    ZBTB46--BCAR1   
Fusion : QuiverBCAR1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBCAR1 [hg38]
dbVarBCAR1
ClinVarBCAR1
MonarchBCAR1
1000_GenomesBCAR1 
Exome Variant ServerBCAR1
GNOMAD BrowserENSG00000050820
Varsome BrowserBCAR1
Genomic Variants (DGV)BCAR1 [DGVbeta]
DECIPHERBCAR1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBCAR1 
Mutations
ICGC Data PortalBCAR1 
TCGA Data PortalBCAR1 
Broad Tumor PortalBCAR1
OASIS PortalBCAR1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICBCAR1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DBCAR1
Mutations and Diseases : HGMDBCAR1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch BCAR1
DgiDB (Drug Gene Interaction Database)BCAR1
DoCM (Curated mutations)BCAR1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BCAR1 (select a term)
intoGenBCAR1
NCG6 (London) select BCAR1
Cancer3DBCAR1(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602941   
Orphanet
DisGeNETBCAR1
MedgenBCAR1
Genetic Testing Registry BCAR1
NextProtP56945 [Medical]
GENETestsBCAR1
Target ValidationBCAR1
Huge Navigator BCAR1 [HugePedia]
ClinGenBCAR1
Clinical trials, drugs, therapy
MyCancerGenomeBCAR1
Protein Interactions : CTD
Pharm GKB GenePA25281
Pharm GKB PathwaysPA152241951   
PharosP56945
Clinical trialBCAR1
Miscellaneous
canSAR (ICR)BCAR1 (select the gene name)
HarmonizomeBCAR1
DataMed IndexBCAR1
Probes
Litterature
PubMed251 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXBCAR1
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Fri Feb 19 17:46:18 CET 2021
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